Mouse element [ mm2015 ]Position: chr13:15,478,590-15,483,335 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: AW209491 - Gli3 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence CATCAAACCAAAACCAGTCAgaatagagaggggatgacactacataattattagaagaaa aattaataataaactgaaataataaactcaccaataaaataatccaagctggatagtcag attaaaaaaagtagtttcttctacatgttgtcttcaagaaatatcactggtaaagatacc cactggctgagggccatgtggtagcataaaatttataaagcaaatataagctaaaaacca cctgacatagctattttgaatgcaattcagtaaaccacaaattaaaattatgcagaagag aaatggctaatctctacatttaattaataagacaaatcattgaaaatatataataattat aaatatgtactaaatgttgggattctcaagttcataaagacaactgtaatggatgtaaaa aatcaagtaagttctggctataaataaaaaacagctatacaccaatttcctttgtgaaca taggtgcaaaacttctcattaaaattcttgcaaaccaaattcaaaattacatttttaaga ttacacaccatagtcaagctgattttgttctaggaatgtaaggatgattcaccacaccaa aattgatactgcaatacagtttataaaagagcgtataaaaggtcttagagagagcggtca caggatcatacccggaacagatctcaacattgtaaaggctgtgtttaacaaatttatatc caacattatttccctaaaggaaaaaaatctggaagtgtttcctctaaaacctagaatgat acaagagtgccaattctctcttcttacatcagatgcaatgctcaaagccaaagtaagagt gtaagacaaaataaatgaaagtgatacagatcagaagtcaaattatccctatttgcacac tatgtaattctatacttaaaagactccagcaggaaactcttagatctgataaatcctttc agcaaaatactaggatacaaaatcagttgcctttctaagtacccacaacaaactttccat atttattctatgggtccaacataatattaagatcaaaacctaaaactaaaagacagctag agaattttttcacaaatgttgatgcaaaaattcttaagaaaatgttataatacggacttc cataatgggtgtacttgagacctaactctgttccactaggtcataccttctaaaggcttc actatctcccagttgtaccaacatattgatgaccttaacctttgggaacccctcacccaa acaatggtaatattaagaaaatcaattcatataaaaagtaaaaatattatgttcatgaca acatgtgaagcaaagacttaatagaggcaacatttatcttgattttgttaaacatgcttg caatcaaatagactcctttaatttaataattaagaataattttataattaaagtaattga attatttagatgccttacttttaaaatatcaaaagtaaaacctggggaaaaaaggagaag gactaaagaagaaacagccaaagtcaagtccagaattcagactgttctgcatcaaacatt tctcaatgaactaaatatcttagaaatgttttaatatattcttatataaatagatcagat catacttcttttaatgagaagatcaaacccaagtaaatatgccatgaatttcatcttcat tattgagagatttggattgctttcagtcatatacaaatacaaatatctgcaatgaacata tttatatgactttcagtgatatatgaaaatgtacacaggtacatctctgggagagagatt gtcaggtcatcagaatctgtgcacaccctgacaatggtgtttgaaagatctttttctttc tttctttctttctttctttctttctttctttctttctttcttccttccttccttccttcc ttcctccctccctccctccctccctccctctctctctctcactttctctctttctttctt tctttctttctttctttctttctttctttctttctttctttcttttccttccttccttct ctctctctctctctctctctctctccctccctccctccctctctctctctctttctctct ttctttcttttccttctttcttctctctctctctctctctccctctctctctctttctcc ccatccttttggtttttgttttagacagagtttctctgtacagctcttgctatcctggaa accactctgtagataagtttggtctggtactcacagcaatctggtccctctgactcctgg ggtgctaggattaaaagcgtgtactacctctgccacccctgagagcttgctttatgaaat tcacattcatgctctatattatttaatgcttccgtgtttgtcagttgaatatttaaaaat cattctctggtttaaatgtatatttcttttgttaaaagtgaatgctcagctttattgcat cttatctttataaacatggttttcttttttctgtgaactgtttatttatagaattcccca cttatatttggaatagataatgcattttcttagatcagaagtcaaaaattccaagtaaga atagtatggtttataaaaagtaatacaattcagaatttctctaccattccatcttctcac tgcctagtaccctttcgcataaataaccaattccattacttttccatgtttgtttccaaa gaaattgatgcataagcacagaaatatttgcatgtgtttatgcctgtatgtgttttcctt tgtttcccctcaactggtagctcattacacacattcttcgtgttttgttttgttttgttt tgttttgttttgttttgttttgtttttaagtaaaatgtttctgaagacttttgaggcttt ccccaattccacctgaccaagggtaagcctgtaacaaggaccataattctcactgattaa atacagtcagggaggctccagctcagaggaggaagaaaacaggagaaagaggtctgtttc taagacatgttgttcataagcttctgccctgaagctatttcttcccaccagaaacctcag gacggataaacagcccctcccagattactgagaaaagcaaacagcagatgtgcagccatg gtttgaacacatccagaggggcacagcacagaccttggggaattagacagccacaagatg aagaaggatggtccacgccaaggccacattagtataactcacagttggcctagcaaggct gccagcaaagcagaaatggagctctgatcctaggagctgctggccctctttctgggtaca aggtgatgccatgtcaagaatgggaaggctagacaagccaggaacatgctgtggtggtgg gacacggaaaacccaaagaagcaaacaatcccaaagcgtaggtctggagtcagccaccga gggtggggctgagtcccacaaaagcatactaacagacatggcctctgggcactgtgacta accaggaaagatgagtgattaaacaagatcttacctgtactctgcatattataattagct ttgtgcatgtttaaattaattaggagatagatttatatgtgccttgctcataggctcatt tgcttctgtttgattccacccctcttacctttttgtcagtatcactaatcaaggaacctc ataagttgctgaagaatggaaatttctaaatacccaactcactgtccagatgtggccaca gtagaaaaaggattattttagctacttcagttctatcctttacacattgattaacattaa gtccctatgagattccagacaaagcagactgggaaaaagtgatatcatgttagaccctac ttttaaggaattcagtctagtgtgaaaagagagaggaaaaaactgagcaagtgcttcgtt ccagtacaaaactgtgcaatgacaataataacccagtatctcagaagtaaaaaggaagca tacatcagtgcatccaaagttctcagtaaaagattccccaaggaaaggatgtttgagcta gatagactcaaaagggtttgtagggattatcttggtagaaaggtgaaagcaagcacttct ggctctgggaccactgtgcatatagatacaatcaaatggagaaatggctcagaagtttat tgctactgaggcaagggagcagagaggtgagagaaaatatatgggcaatgccaaagctgc taaagcatttgagaaatgcaccctttacaatcccgacgagttccagtccctatgaattcc actgagtatccatctacaagatcatccagggtcaccagtttgtgaaacatgacttgcaca gttcatccaagacctgagataggatagcacaagccatcacattttacacaccaaaaccag gatgggatactcactcccacccttgccatttcctattgcttcccaaccaagggagtgaag aacaaatttattcacagtacaagggtaatctggcatttaggaagtagagaccagaggggc tgctgtacatcctaccattcataagaaatccccacagcagagctagtcagttcaaatatc aatggtgcagagtttaagaaatctgcccttcaaagtagaaacattttccccacaaacagc tacactgtgcaacggtgctgtcttttgtaagtctaatcttcccatcattcacctcattta ttctccttgactttcatgtcaacacctacctcagtaacaaccctttTCCTCAAGCTCTTC TCATCCPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.