Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs2006 ]


Position: chr3:72,368,145-72,370,230 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LINC00870 - RYBP

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
gctgAGGCTGGGATTTAGGGTGTTggctttgaagatgatcacaccagagtctgggacagc
agagccaaggcttccctcggggagaacaagtccaggaaggaggcaactggcttctgcaag
tcaagctgagtgacttgcttcagctgtaattatctgattatttcaggcaaaagcaaaaaa
ccaaaagccgaaggctttggatccagctgctgagtttcagctatttgtcactggcagcag
ccagacacccaccctggctcctcacagctgttgagtatggacagggagggttattgtcat
acctggggctctaacaggcacaaagagtgaggtgcagtcatgtcctcttatcttctcttt
caacggtaagacttcagcaaatttcctgagtactgggccctggatatgactcagcagcca
tctcctctgcttctccttgagggaggtggtggctacaagggtggccttgggggttaagtc
aggcctgggctgcattcttgccctgctacttactagctgtgtcatcttgggcaaatgtct
taacttctctgtacctcaatttccctacctgtaaaatggggataatagtacttaccctac
aagttgtttggagggtgaaatgagacgctcttgtaccaattaggcagggctttgtgcctg
gcacctggtaaatcactgaccagcctgtgaataatcagtcatgtccccacattacttcag
tcaatgtccacctctcccacaacacagcagtcacaccacgtgtacataatggaatactat
gaagcagttaaaaaggaatgggccccccacctttgttattatgtgggaggatttcttagc
agaggctgggatgaagcaggtccttcgggatgggctagtggacatccagggatgactgat
gagtacagctttctcggctcatctggcccctgtgggtgggcagccactgcaggctgatgc
acagatgctcataatcttggctggatatgaagacctcaataaccccaggcccccaccatg
aagccaccccctggtcccaactcaagcatcacccccaatatccgtggacacagtaagttt
ctaccagggaatgggggagaatcctcgactcaatttgctgccaaaccaggcaagtgctcc
aacttgacagaattatcagcagtgagcgaacagtgacagatgaaccgagaggcgagtggg
gacagccagcctgcagatctgtttcccagccccgagattccatctgggctcccccgcaac
aaaacaggaatttatctgcaaaggtgtctgcagggccttgtgtgggagtcaattttatac
ccctcaaccttttgtgagcagctgaggaacgaggcgggagacccaggcgacaaacccctt
atcactgccctgagcgtcttctcacccaacaaggctcccacgtaacccaattctagatgc
cactggaggaccttgaggggaaaaggaggtctggaaatgtggttctttagtaaaagggat
tggctatcttagggggtgaatggaaaatagtcaacttcaacccaatgagaaagtattctt
tctgccagcattctgtcttatgagtctccccggccagccttgtgcccccgcagccctcta
gggacgggaacttcttgtgtgggagccactggtcctgctggggaaggctcctaagatgat
aagactggaaggctttctctcaagtcagcattgtgtggctgcagaaaagccaggtggtac
ccacacatgtgtagctatgggagctgtttgacctctggagctatcacactgtgcaaggga
taggggttggggagggggccggcaataaaggccttcctagccccctcattgacactctgt
atgagctgctaagtgaccgggaagctcaatgcctggacagtccacccatcaattggactg
gtgggactccagctggagtccatctaaagatcaccgtccatatgtcttccatggaatgtt
tcagaaagctggtctcctggaagtagaaccctaggtcaaagggcatatcattaaacattc
tgacagacactaagagctctaccagtTTTCACTTGTGTCAGGCGAC
Primer
(+)caccaggctgggatttagggtgtt
(+) gtcgcctgacacaagtgaaa


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.