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Mouse element [ mm2004 ]


Position: chr11:119,524,145-119,526,202 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Rptor(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CACCACCACCTAACTTGCAGcccttttaataaagtctctcttccccgttttaggcacctg
ctacttagtctcttcctgttccccatcctggcactgtcatgcttggagtttatattccaa
gataggaatttgtgggacatatttatatcatagatcaactggtactctcccttctacagt
aacccccctttcctctcaacacagcagggagccaaggtccacttgtgcccacctgtgtgg
ccgaaggagggatagatacagcaaacgtgcctcatttgatcatgctggcctctgggatgg
ccgtgtgctcagagttgacgtctagcagatgtcagatggtagaattcatggtgttctgac
aaattagacctttagtgtgtcagagagttgttgaagcgtagcccagagctgtgctggaag
ctgtgagtgtgactgtggcctgtgggaaggggagacagagctacctgtgctgagatgagg
ctgctcagatctcaaagacatggttcaggggcctaaagaataccaggacccctgtgtgcc
gtttcttgtgtttgcaccacctgagcatgagccagagaacatcccaaggctgcctggaga
tcatgccagtcagtgcctctgaggagagagtgagaaggcacaggccctgtcacctgttcc
aggtggtgggacatgagctgtgagtgtcatggagtaaaagcattgttggctggttcccag
gaattgtgaactctgggggagcccttgcttttagccacctttatcctcattcctctgcct
tcaaaatgctgttttgctttctggaaacgactcttgtctcttgtcagaaaagcagggaga
ggctgtttggttttatggctgacattaaatgctacagtggtaatactaaacacagttcac
agaatggggtgccctagtgcttgttggggactgcctgcctgacagcagtgtgcagagcca
gctgctgagcagagcaagtgggatggggtgtctgttctagctggtagtggtttggctgtc
agaagcatggagattctggtaccccagagaatgatttgggacacacttggccctgctgcc
cagagctctttcgatgaactaagacagtgggtgcatctgctcttggcctggctttgactg
cagaacacatgcacagagcctgctactagcaggggaggtgagactggagctccagatcag
agccagtaagaggtcacctggagtggcctgggccttggagaacactatggtgaatgtcag
atgggcatggctgcagagcagagtagtgaccttgggctggctgaacttggcgctccaggc
aggcagtgggattagctgtgaccatggctctttgggcagtggcatagtgctaaaagcagt
tggagcctctgctttctgggctcttggtttagaatactgcattctctgtcctgttgtgct
ggtatcttaaggtagtgtccctgttctcctttgagagaggatagcataaccactgtggtt
ccccctcattcctttctagtagacataaatcctgaggctgtattttaggtcaggtattcc
agccactctccctcccctgtgccaggctgtaaagtattgcagctccaggttttcatcatt
ctgtaggcacgtgggatatgaggcttttggggaggacaaggccagctatggatggtagct
tttgtcctaagatctatcccattccagggctgagggtcccaccattagtcagaccctgga
gtggatctgctcagctctacagagccttgtggccaggctttgctctgaagctcagtcagg
agacaggccccacagtgtgtttgccactaattataaaatggagggatgacattatgatta
ataagatacagtcatcaagagccatccctaatttcaaagttacccttttgctattatgta
ttttctcaatcaaaaattagccattcaaggttacacaactaattaatggcggaatccttg
aaaggcactctgatttacactccatgcagtaggcagtgctcaactaataagtcaattAGC
GAGTGTTTACATGTCTGC
Primer
(+)CACCACCACCTAACTTGCAG
(+)GCAGACATGTAAACACTCGCT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.