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Human element [ hs2000 ]


Position: chr9:75,758,359-75,760,288 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ALDH1A1 - ANXA1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GCCCTGTGAAAAAGATCAGGtatgaatatgaatgagtagtaaagaaacagtctaggaggg
gagggatacaatataaaaacaagtacactacaaagtcaagtaaaatgacttagtattcaa
gatccaaccagtgtgcagtatgctttttagagaagcaccactcctttttataaagatttg
aaattatactgtggaggactggcttttgagatgggtcttaaaaatgtgaataggatttca
acagagagagctcaaactcagagaaagccttgccccagaaatcagtttgaaagtcttctg
agcctctgtaagaccagtagaaataatgtctcaatagctgaaataactttaatttattaa
gcaacgcaagatcttcaagacaagtagtgtaagcaattctaagtgtcccctcctttggga
aaaatgtggtttttctaccattttttttttgaagtgaaatgagtaatttgaaaacacctc
ttttgttttcttctttttctaaagatctcatatttcaatttaaagcatctgccaagttaa
agttgacctgcctgtttaaaaatatacaggtatttcaagaaaagaaatggtactatcttc
ccattacttagcttcagggaggattatgcaatcccctgacaatctttctcccctaattcc
ctacttccgggcaaattctaaagtcatgattcatcagaccacagttagatatcctgaact
cttgaaacttcttctgcaaaagcaactttgtttgcaaaatgggttcttcattaattttcc
cagaaacactttttttctgttagtgacattcactatacaatagttctcctcaatgcagta
cttatttttaacaaaacactgtctatagagttttaaaaactatctcatagttatattaaa
tttagtacattcaagctgcatagaaatgtaacttagatgtttcagtttaaaggaagttta
ggaaacactgtattttaagaagtccatgaggcagttctgatctgcatttcatttccatat
tgcaaatatcaaatactatgaaaatatttgcctaacccatcatttctaatcccagtgagt
ttttggtgctcccccttcacccaactaagccttattctctttacatttagaacactttaa
gcaaatttacctgtgtccataagcaaataagtctcagctccaggcagctgacttcttgtt
cacccagatggaaataaaactacaatgtgcatattataagcacctgccacagcctcttta
aaaatgccaaaccttaaccaggcaacaggatacagtttcaaataggaaaaggagtttttg
atggagcctaagaatctttaattctctggattgaccactgtaaacccattagctgaattt
aaatttcttggagttcttctgaatctggctattacatgtggaatttagaattgtttcttt
ttcacattttgcttatttttagtctctccaaaggactcctggttatgtatcagatttagg
gaaaatgttagaatttgcatgtttggctttgagcttaaagatgatcatagttatgtaaag
tgtgcaggttatcccccttcttatgttatatttttacccttttttatggcagttttgtgg
ccttccataattgtatagatatataaaaaatacaaatacttgaaaagttaagaggatgat
ttttgtatactaactagctacacaagtgtcacttctaatatttctgtacaattacgacat
tgcaagacattttattttaaattatttggttattaaaatttgtcttatatcccttgctat
cattatgcatgtagaaaaaaaaagatgtgttgttgcaaaatttaagcattgttaccttta
aactatggttagtgcaaaataggtgtcttttcacttcaactgtaaccaatTCTGCATGTT
CTTGGAGGTG
Primer
(+)gccctgtgaaaaagatcagg
(+)cacctccaagaacatgcaga


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