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Mouse element [ mm1998 ]


Position: chr13:118,499,198-118,500,342 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 4933413L06Rik(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTCAAAGGCATACTCAAGTCTTaaattctatttcttcacattttatatctctattaattg
atcaattttgtgagtgttgaacagttaccctggccttcatggacatatatctaaagttag
gtttagaaaattttatgtttgaaagactgtcttgagtagagactatcttacaattataat
tatggctgtgctcatagattaaatttattttttctaatccagggggttaaaaaccacaga
gttccaagaatatgatattcacatactcctcttaatttaacctattactttcttctcatt
tcaatataatgaaagtgtcttgtgcatatttcctctcactctggagcacaattacatggt
tcaaacccaagcctgttctgtgtcagccattttattttggtcaagttcattcgtttctct
gtcctccattttctcctattggacattaagatactaatagcatcagtttggtggcattac
ataagaattaaaagtattgacatttgtaaaccattcagaatgttgtctggacaaagtaaa
tgctcaagttctgatgaactattatgactcagaagtcaggcagtctctaaaattggcttc
cagacagagtgacactgtatgtttgtatcaccacctcccactcttatctagtacttcctg
gaaacattggaatacagttaggaacacactagagaaggctggctgggtgaaatttctttt
tttccctcatagctccagggaagaaacaatttgtgctgccttttggatcaaaaagtttca
gatagcttactgttgatcttgaatctaaaatcaagtgatatttaattctgaggtaagata
acataatcactgcctggcatgtgctcccaggctgtgggatcctgtatcctcaaattctta
agtgagactcatggagcaggtattagtccttaaacgtctactttcatgataccatgtcta
ttccattttggctttttggggatgtaagaactgggcacccaaaggaacaaataggaaaaa
agtaagcaatgaaatcacccaaaccacccctcatgtaagagttagccatccaaagggaca
aagagaatgaaagtctgcaaaaaaaaaaaaaaaaaaaaaaaagaaAAAAGCACCCAAACT
AACCC
Primer
(+)TTCAAAGGCATACTCAAGTCTT
(+)GGGTTAGTTTGGGTGCTTTT


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