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Mouse element [ mm1996 ]


Position: chr9:58,653,374-58,654,551 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 2410076I21Rik - Hcn4

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CATCTGGTCACTGCGATACCcggcttcccccttcctctggctcctgtctttacttcttat
tcatcctgacttttctgtctctttcctgatagcaaacgtctttgtcttttctctgctcag
atacacaaatcacttactaccctccaattttaattcccgttcatctaagacccaacactt
gagcttgctgggtaaccgtctaaaaacaacagactgagtcagaggatgccgggggtgggg
gactggtagagtgcttgcatagcatgatgctatacccaaggaaacatcaacaccactgcc
acccagtctgctctagttgtctggagtcttcaacgcatgctgtctaaacacccttgcctt
ccttctactgagaccacttaaaggtctcctctacctggggacacacgtgttttacatgac
aggagtaatcccaagttcacctgcacactaagagtctttctttgtgaagatctcaggctg
cttcccttcccctcttgcagactgccatcaacccggccgtggctatcccgcagccacgcc
cacagccacgcccacaacctcccagccgccactaaagtccatagacttcgctctgcagct
ctccttccctgactggttcctcacttccctttctgctttcgctcatccacagtcacataa
atgttggcactttgttaagttctgttgctctcgtttagcatttaacctcctctgaatttc
acccacacccacagtttcagctcatcatccccgccctcaacctcaatgcagggcacaatc
taaagacttctgggaatcatggtggcttaaatgcaggtttacaaaactaccctccccgaa
cttgacagaaaggaacaaaaagaaacagaaatgagagaaaaggctgcctccagggccgaa
atcacagcacggtactccgcgaatacaaacggagatttaaatagaggcaggccttcctct
cgcaggggaagatacagcgatatgaggatcaacagacttgaactgataaactcagtgtga
tgctgaccaaaaataccattctagtttttaacaaaatcaagttattttaatgagatagtt
aagttggtaagaaatctgggcaaattctttaagaaatgggtagtagtgagggagggggtg
tgggagtgactgaaaaaaACACCATCTTGTCCTGCTCT
Primer
(+)CATCTGGTCACTGCGATACC
(+)AGAGCAGGACAAGATGGTGT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.