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Mouse element [ mm1994 ]


Position: chr5:135,265,629-135,267,257 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Eln - Wbscr28

Timepoints:
e14.5

Negative for enhancer activity at e14.5. Results for this element were included in Kult et al. (2021), PMID: 33448926.

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGTGCTTGCCTTCAACACAGTAtataactgaggatctcttgatcttctgaccctcctgcc
ttcacctccagagagctgggattacaaatggtactaccatgcccagctgtgacagatctc
tgtgagtttgaggccagcttggtctacatagtgagttctaggccagaaaggctagatagt
gaggcccttgtctcataaagcaaaacacacacacacacaacaacaacaacaaaacccgag
atggacaggcacttaagaaatgagagcagaggttgacctctgatcttgacgactgtgtcc
atgtacgtgtacttgaagagatggaaggttctagaaaaccaagctcctcattcctcttca
tgtaaaacgttggcaactgggaaaagtttacctgtgcatgtgtgcacatttgtgtatttg
tgtgtgcatgtgcatgccaggtgtgttttcattttgaatgatgtgtatctggcaatcatt
agatgtgtgcctaccaccctggtgaacctaattggagacacgtgcttaagagtcgataga
ggtctgggcagaccctgttataggaagtccaaggtcagggctgagggtgggcgcaacgca
atgcacacgcagagtcaggcatccctgactgctgatcttttcctaggaaagagaactggg
tgttcaaagtctaggggaaaatctataaaagcaccaataaccattcatgtttctcaaaat
aacattgttaggaagaactctgaagtaaagaaacagtatttcacacatcctaaatcagtc
ctgcagggtcaggcaataactttgcacctatcatctttcctgtgcacgagcaatatccgt
gtctccaccagaccctggccccaccctgccctacagccctgctttacccagacacccata
aatctcttcttgttccacaaaatcttcctgggaaaggccccactctctgtgtctgctctt
ccgtccaaactctcaacgccttcaagattttatgatttcggctttgttgacttggcctcc
tgggttcccccgcggtaggcggctgtttcagagagggctagaggttttgggtgacctcag
cctcactcctcgcctggcctgagctagaggatcttgcaagcaagatccctgcagctgcca
gagggggccctagtggccacttacagggggccttcaagggcatggatcttggtccaggtt
gtctctgtacactgagcttctaattgatctaccttcaacatccaggatctggcattaaca
aaatctcacattttatatcctccctgcccctcccctgattcttctttccatgagagactc
acaagggggaacagaaataaggtgcaatgctcatggtcttatttatgtcacagatggtcc
tggttgtcctctgagctaaaaccaccaggacacagataaagacatggccgagagctgagg
acgtagctcagttggtaaggtgcttgcttggcacacacacagcactacctagagtgggtg
tggcagctcaatcttttaatctcgggatttgagaggtagagacaggaggatcagctagta
gttcaagattctcctcagctagtaagttggaggtcagcgtggactacTTGAGACCCTGAC
TCAGAACAA
Primer
(+)AGTGCTTGCCTTCAACACAGTA
(+)TTGTTCTGAGTCAGGGTCTCAA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.