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Human element [ hs1986 ]


Position: chr9:13,314,075-13,315,963 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MPDZ - FLJ41200

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CctaTGGACCCCTCTGAAAAACTGactgatataattggggttcagagggtctgttggtca
ggcctctgtacccttctcccaccaaccttcaccagagaaggcttatttttttttaatctg
ttttgtattaattggtcttctgattaagatttcatttgaggaagggccctacctctatag
gaaagtttgaaaactactgtgttagagaaatagtttatgaaacaccacctatgttattat
gtgaacttgaaattaggaaactttatcttaagtttattacttggaattcatttgctatct
ttgtaattgtatttgcaagaatggaaaattagttttagttgtgatgaaatgcattttggc
agtaccagaacatgacttttctgtttgtaagtaattttaaaaggttatattcttccctga
gtgcccatttgtgagtacctattattactattctactttatgtattagtatcttgggaag
aatatgccccttactgtagaaccagggattacaatattattttttaagatttttaaaaca
actactaaaaggatgctgtaattacaacacattaaaatgcttttactgttgtgcaaaaat
tataacaactgctttagcttttaccatagtaaacacagaaaaactgataaaatacataga
gtgaaaaaacatgattttttagatgctaattatctgaagtaaaatctgatttggttctat
tttattcttaagtagtcatatatgtatatttcctttgaattcagatctaataacatgtat
actaataatgagagttgtgaagtagtacacatactagtcttgagtttaaactccaagttt
aaacaccaaggtgtttttcaagatgtttttcaaaattataataatgtaaaggttggtcta
ctaaaatccttcagtagcaataatgctatttcttatgtagatagctaccagaaaaaaaat
gctttaatgaaccattcactatggtttcatttccttccagtaaaggaagattatgtagca
cagggatccagaatcaacaacctattgaggctgaatagcactttgagtagggatccattc
gaaatgtttaacaattagtgaggcataggcactaaagagaggaaggagatgagattcctc
tttatggaaggagtggcaaagtcacatggcattaagtcatgtgatatgggaggaaagtct
gtgactatctttggaaacaatctactacattccttttttgtctgtttgtcccaattggct
tacatctcagaattagaactctctcatgggtgggctaggaggaggaggcaaatcattttg
ttttcttttagaaatattaagcactcctaagattccacatgagctgcattaagatgccct
agaaagatccaagaaaactcaagccacagtcctcagagtcattaaaaatcaagaggccac
agtgtaaacttgtgactatgttctaataacttaaataaggtgttagaaagggtgatgtgc
tggaaaactcctaatgtgactcctgtgacttttatgacatttctcaaatgttgcctatat
tgtacccaagataaaaggtcctcccacttctctagtgaagacattccaattactgaacaa
attctgatcagtaagatgtccaattgcaaaatgaatattccaaactctcttccttattta
taagcaaacatatttagtaaatatgatgaaagaaaagttcccattggtaaaatcaataga
aagtgtaaaaacaaaactagaaataaaatttgttaaaacagaacatatatttataagatt
attactcaattaatgtacaaaaagaaaacttgagtaaatggaaagctatgctttgttgtt
aaataagaCTTGGCATCATATCAGTTCCC
Primer
(+)CACCTGGACCCCTCTGAAAAACTG
(+)GGGAACTGATATGATGCCAAG


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