Mouse element [ mm1983 ]Position: chr13:15,079,312-15,084,029 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: AW209491 - Gli3 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence TGACCAGCAGTGGAGAGATAGAacctgaagaaaccacctccagtagatagacagaggccc ccagtggaaagatgggaccacccacccatcttcaacatttttgacccagaattattcatg tctaaaagaaataaagggacaaaaatggagcacagattgaaggaatgcagcacaacggat tcagtgaccagctgaacttgggatccatcccatgagttgacaccaaactctgtcactatt actgatgccatgttgtgcttgtagacaggagcctggcatgactgttctctgagagactct accagcagcggactaaaacagatacaaatacttactgccaaccattggactgaggtcggg gattgtatggaagagttaggggaattattgaaggagctgaacggaatagctaccctatag aggaaagaacaacagtaacatctaacccagacccctcagagctcccagatactaagacag caaccaaagtgtatacatgggctgttcctacatgggctgttccatggcccttgacatatg tgtagcagaggactgccttgtcttgcctcagtaagagagaatgagccaatcaatccttta gagacttgattctacatgaaagggggatgctgggtgtggtggcgagtgggggtgagtagg tgagtgagggggtgggtgggtagaaggcaaagagcagggtgatgggatgaagaattctgg aaggaggggggccaggaaagggtctaacatttggaatgtaaataaataaaataatttaat aaattaaaacaagaattttctttctgtattgacccccctctctttgtcacagtgggagtt ccttcctgttattctgtttctctcttcaaaacatctgtatcctgctatctgttcccaagc ttcttctcagcgatgatccctttatagtatcctgatttctggatccatccagctactcat atctgagggtctggagctggggcatttcagatgagaaagaacatgtgatatttgtctttc tgagtcttggttacctcactcaatataatcatttatagatctacccattaagtggaatat ttcaaaatttttctttatagctgaacagtattccactgggaaaaattgctacatttttat tatccactcatcttttgaaggaaattgtgatatttccattgttaagcaagtatctgtgga aagcttttaagttctttgagtatatatgccaaggaatggtatacgtaagtcgtatggtaa atttatttcttaagtttttttttcttgaggcatcttcatacatattttcatgatgactgc acaaatttctattttttccaactgtgaatacgggctcccctttccctacaaccagcattc cttaccagttgctttgttgatcttatgactagagtgaactgaaatctcaaagttttttca tttccctaattactaaggatgatgaacatttctcagttatggtggcaaccactgacttct aattagacttaggggccactcaacatgagggaaatcatgtctagtactggaaatctagtg agcttcccagggctaatgggctcatggaccttagaaaagagcctactatatctattttgc tagactaaatcctaagtgcattctaaatcttatctttatatcctgagataagtgtagcta ccgctttttatcaaagcctctcttcccagaaaacagtacctggacataatgcaaaaatat ttattttgtgggaaacttagccccaaaggatgtactgatgacagagctcctccatctgtg acccaggcaatacctcatggaaggactataagagccagaatgggaaacactctcctagaa atgtttcaaaaacaagactggaacattgtcagtatcaatggacacattaatgtggaaggg gaaacctttttctggatcccacccatagaaaatgaactacagacaaataatgattgctgg aagatggagaattagccccaagtatgatactccttattggttttccaatgcagagtggtc agccttgataaatgttttacaaacatacaacaaaaatagacttagtcgttttcatgtatg tatgtacatacatacacatgcatacatacatacattaaacaaaaaagaaaaggaactatt agcatgagaagggatggataggaggggtttagtgggggatagctggaagactggaaggga aagggaaggaaagggaaggaaaaagatactatttaacttgagtaaaaatttaaaaaaaat tatcttacaggaaaaatatgcatgtatttaagatcactctcactaattgtttttattgga tattttatctaatgacatttcatatgttattctcttactcgatgttccccctgtctgaga aattccctatctaatcacccctccccaagcacccacccactcctgcctccatgctctgcc attccactacactggggtctcaagccttcagagcaccaaaggcctctcctcccattgatg cccaacaaagccattctctgctacatatgtggctggagacatgggtccctccatgtgtac tctttggttggtggtttagtccttgggagctctgggggggggcggggtcaaggtggttga gattgttgttcttcctaatgggttgcaaaccccttcagctccttcagtcctttccataac tcttccattgggaagtccttgctcaaatcaatggtgggctgagagcatctgcctctgcat ttttcaggctctggcagagcctctcaggagacagctgaattaggctcctgtcagcaagca cttcatggcatccacaatagtgtctgggtttggtgtctgtatatgggatcgatccccagg tagggcagtctctggatggcctttccttcagtctctgctccaaattttgtctctgtattt cctcccatgagtattttgttcccctgactaaaaaggactaaagcacccacattttggtct tttatgtttttgatcttgagatctgtgaagtgtatctagtatattctaagcatttgggct aatatccacttatcagtgagtgcataccatgtgtcttcttttgtgattgggttacctcac tcaggatgatattttctagtttcatccatttgcataagaatttcatgaagtcattgtttt taatagctgagtagtactccattgtgtaaatgtactacactttctgtatccattcctctg ttgagggacatctgggttctttccagcttctggctattataaataaggctgctaagatca tagtggagcatatgtccttatttcatgttggggaatcttctgggtatatgcccaggagta gtattgctgggtccttaggtagtactgggtccaattttctgcggaaccaccaaactgatt tccagagtggttgtaccagcttgcaatcccaccagcaatggaggagtgttcctttttctc aacatccttgccagtatctgctgttacctgagtttttgatcttagccattgtgactgggt gtgaggtagaatctcagggttgttttgatgtacatgtccctgataactaaggatgttaaa catttgtttaggtgcttctcagccactcaagattcctcaggagagaattctttgtttagc tttgtaccccatttataatagggttatttgattctctggagtctatctttataagttcgc tgtgataatggatattagtcctctatcagatatacaattggtacagatcttttctcaagc tgttggttgccattttgtcctattgacagtgtcttgtgccttatagatttgaaattttgt gaggtcccgtttggtcaattcttgatcttagagcatacaccattggtgttctgttcagga aaatttcccctgtgcccatgtctttgaggctcttccccactttctcctctattagtttca gtgtatctgattttatgtggaagttctttatccacttggacttgaactttgtacaaagtg acaaaaatggatcaatttgcattcttctacatgctgcccaccagttgaaccagcaccatt tgttgaaaatgatgtccttattccactggatggtgttagctcctttgtcaaagctcaaat gaccatagatgtgtaggttcatttctgggacttccattctataccattgatctccctgcc tatctctgtacagtcaccatgcagttttatcactattgctgtgtaatacagcttgagatc tgggatgctgatttccccaaatgttcttttattgttgagaatagtttttgttatcctgat tttttttaaattccaatgaattttacaaattgctctttctaactctatgaaaaggtgagt taagattttgatgggcattgcattgaatctgtaaaatgcttttggcaagatggccatttt tattatatatttcctgccaatccttgaggtgctgagaagaagatatattctttagtttta ggatgaaatgtactatagatatctgttaaatccatttggttcataagttctcttagattc actgtgtctttgtttaatttctgtttccaagatctgcccattgctgagagtggggtgttg aagtctcccactcttgttgtatgaggtgcaatatgtgctttgagctttagtaaagtttct tttatgaatgtgggtgCTCTTGCATTTGGAGCCTAGATPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.