Human element [ hs1983 ]Position: chr9:30,935,536-30,940,148 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: LINC01242 - ACO1 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence gcCCTCCAGCACGTACCTTTCTcagaacttcttttcaaccataacaatgtgcctctggaa ggcatgggccactttatctgtgaattgaccaaggagaggtgtgagggttcagaacaactc ttgaaggtgcaaaaccagcttgggggccatgctctctttcaggatgttcagaagcaatct caaaatgagtggggtaaaaccatgcatgtcttggaaggtgccatagccctggagaaggac atgaaccaggaccttttggatcttcatgcactgggtttggccacacagattttcatctct gtgactccctggagaggcactttctagctgaggaagtgaaactcatcaagaagatgagtg gccaacctccacaggctagtcaggccccaggcctggctgggaaggcatctcttgcaaagg ctcacctttagcatgactaggagcctactgaacctaggtaggtcctaggtctcaaggtcc tctcttagagtatcagggcttctgcttaagactgcctccagcaactaggcacctttttaa gcaccttggagccctttcccaagctttgaagcaaatggaaataaagcatttagcagaaaa aaaaaaaaaaagactatagctttatggggcttataggtctgggattttacttggcaaact cctaaaatgagttgagattggaaatatctgcctacttgcctttcttcctcactgaaatat tagcttctacagggcagggattataaatgtcttatgattatttcatgctcagtgcttagt gtagtatttgccatttgataaatatttaataaatgttttttgacttatattgaataaaac cttttgcctcattgccattgaaaatcttgattttctagtcagttatcgttaaatgtttag atgatttttgggagggtgtttccccctgtgacttattaggcttggtgatattcctttatg aacattccctcagctattaataatttctccaatttcatctgatcctagtagatgcttttt tttcttgccaaagactattttttcattttactacttatgggaatgcacacttttacatcg actataattgctatctggaccctatttgcttctcatcttgttaacctgtttagagacttt aaaatgtgactatgtttacattttacttcacaaacaataggcttcattttggttatcctc tctgcaaaattactttggatgattggaattctatcacattgttctcccctaattacttat agtgaattttgtacctataattgcgtagttacttaatttaacagacaaatgttagtgaac tgttctggactccttaagaataatttgttcctaattaaaaagaatggatcttgagcaaaa aaaggaaagagagaaaactgccttttatttagccctctactatatttcagattgtgtgta tttttttctcaatttaacctagtctaaaaataatacttgtaattcctgcgtcttcaatga agaagcttttctcagatctcttatttctgtaatgactctgaagtccccatttataactct atcccgcagcatcataccaatcaaatttacagttaagagactgaatttcacacaagtggc catgacttttagtcgattgatttcactttaacacatcctctctttattcatcttgaattg caccacacaacagacttccgctcatctccttaattgaaaagttgggtcggaatgattgct taatttctgtgtcctgtgagaacaaagtgctcactggtgattgcaggactgtggtttcat taaatttatgccttatgaatttaacaacatttggctatttttgtaatctcactagcaatg tcagggactgatcggcctggctgcctaatgtcaggagcctgaatcaaaatttgggcattc tgaattgccattgacatcaattctgccttctttccttaggagttatacatcagtagtcac agcccttactctgtgtaaatagaaaaaggtatcaggcagtgctgttactgaatacatctg actagaatcataagtaatacaggacttgctgcaatgatttcatttttacaaagtatatat ttagtttctttctctcctgatttattcatacaagtatatcacacgcaaataactaattta tgtgtttttagcagagggaaggaaaaattaaccaataataaaatatacacaattggacaa gctatgttagaacagagattgtaaatataaaaatcagatattcttacattgctatacaaa taaatacaaatatttaaactaagctgtgaaggagaaataatatattacatgctattttca tagttatttttattaaaaaatgagagttatttgatgatgtgtatgtaatgtagaaattat acattaattgcaaattaaaatttagtgcaaaatgaggtatctggattaagaggtatggct gttaccattgaaccatatggcaattaggctttggaaaattaagtaattcaactaataaac ctatttctaaattaagtgttatttattggggaaaatataaaacaccaaaataatacatat caatagtattaagatttttattaccatagcatttgctacacatgaaaatgaaattatttc aaacttttgtttgtcttacacagcacggcctccatggagactcatttaattcccaaagga aaagcaattattaatcctttcttcaatccaatgcattataacctgagtgactgaataccg attacatgttgtctttctttgttcaagcgtctcctttcctaccctggaacaagagctttc taagggcaagaactgggttccatccagcaagaaaatcccaggatgtggcattgtaaacat ggaaaaacaccatggtttctacagtgagataaaggaagacacatcaacatacattacaac tgcagagcattcttggtaacatggaattgaagaagctttgtaactctctgataacatgtg aacttccatactaacatctgtagctaatagcttcaaggtcttataattttctcatatttg tttaatcccttttttctacctcccatgtccttttgtcacagttctgtcagtcagaacaca agggagaccacaactttcttacttgattcgttattccagatgctggaatgcagcttgagc caataaaacattatgacagacatccctgttcgaaaccagcctatttgacacacttaaata tacactttcctccatcaagtactgttttgctcattttgcactgttcgaaaatctcagtac ctttctagaggcaaaagggaaaaagattttgcaaaaacaaagcatctacataaagtcatg gataaaagattgtgttctccatgttcccagttgcttacagagaggtgtcttgttcccaca atagatcgtggtgtgtattacagtggggagtttttgacttttccttcatataaatccttt ctgcaatgtcggcatacaagccatgtattttcctaacctgcatgaatttatttcactgac tttataataaactatgtctgattcattttcacacactgagagcttaatgccattcaggtc aattggtgcagcaatattttctctctttttttaaccttccattttttgggggagatattt caaaagggaataaaaatagataagtcttgcacgcaatatgttagctcttcaaaaacatta atggagtggttttgatggtgtattgtattgtagctgaaatatttttcacttcagataatc cagatttaattctaaggcattattatttggctgaccaacttgtatcatttttttcatctt gtcttcatacttcctggacacttgttatataaaataacttacaggtttttactttaagtg aaatgagaagctattgcaaaatttagagtaggggagtggcatgatctcttttaaaaacat cactttagctgctaattagaaatggatttggggaagcggaagtacacatagaaaataaaa cctgcatggagattactcaggtagatcaggtgaactagggttgagggatcgggaggaaag agaagcagatcaactaaagagatattttgagtatagaagcaagccgttttagatagacaa atattctttgaggacagaatgttctttcatctctttttccggctaaataacacttttttc ccccaagtctacatctccaggaagccttccttgtcctgcccttgctgtataatggtcttc tgaatgattccttagtactgtctttatctaacaagagcaaatctctaagcattactttct tcgtcattctcatcaaacattgaagtgtttagaatcaaggccaacatctttcccttctat aactcttacaccgaacaaaaattttgacccacactatatttattacgaagaatgtatttg attgcataaaatagaacgatttaattttgatggcttaaatacatacgtttatataaagag atatagacataagtgtgcatataagttcatttagttgtccaaaaatgttaggattggcat atcagtgattattgttcctttccttcactattGCAAGATAGCGTCTCATCACCPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.