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Human element [ hs1982 ]


Position: chr3:164,170,901-164,174,258 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LINC01192 - SI

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAgaGGATTACAAAAATGGGCAGAAatagcttatatatttaagacatattagacatttag
gagaaattgacacctaaaaaggttattatagtatgttatttaaagtggcaaaactaggcg
tggagtatcatgggacaatagagaaaaagtttcttgcctaacgtgttaggcaagtgttgg
gcgatgtgttaaaagacaggctttttgatgaaagtctcaacaaggagattaatatgagca
caagtacaggtgtgaaacagtatgctgtatgtgtggagaatttggaggagttctggatag
ctaggctgtgaagtttaagactaacagcagtagacaatgattctggagagaaagaaagtt
gtgatcagtaagatattctctatcttgtttgaataaatggtcaatttagtattattttat
aaaactgatttataattttttaacacaaaacattatttcttttatatttattgaagtctt
attcctccagtagagaagtttttttaatagtatgataacttgatcttatgtcctcatttt
atcatgtaatcttcagtattttccactatttgtcagaaactaaaggattaaataactgtc
aatttcttaaaatgaagctggaaatatttcaaaaacccaagtctgctccctcaacttatt
ttatattattaaactaacaccatttctgttagtagactgcttgctgaaaatcatgtcagt
gatatgttctaaaatctggatgctcgtgataaattgacacaattgagtgtcaaacatgcc
aacatttcagtgagcaaaatgtactggaatatgatatgtgtcagtttattgcttctctag
aaatagattgaaaatgaagtgttagaaataaagaagaaagtgtttatctacacatttggc
atgctcagtgtttttcttttcatcttttaaatttcatagtttccaagaagtgcagaaatg
tgaaaagaattatttttgtacaacttggagtaataaatatgcatgagcacttttccaatt
atgtgaaaattgctttttgtaatttatttcagattttgtattaaagtgttataattacga
gattacacgtgaataaactggctgtacataaatgttttcccatgtcaattgggaaatata
agcatgttgagcagaattttcacaaattatatctagtataatttatgaaaaaatgcagca
catatatttataagcataaaatatatgtatatttccaaaaatagaaaactcactcatttg
agttttgcacaacttaagtcaatttgtactgcatttctcttttctcaagtggggctcctt
taactccaaggagataataaagaaagattaaagtcaaaaaggtaattcattggaatgata
tggatgtatctcatgagacctgatgtcttaattgcaatgaggcttttgaaaagtctgact
ccaggaactagcaagccatgaggaatcaaggatattgctctttttttactcactcttaat
ctagatcttcttctctctcactatctctgcttctcagtattcctctttatctaaagttat
aagatttctttttctgcctcttttgtcttatctgtttccatgttctcaatttcaggccca
gcatttcttctgcaagactttgttgttcacagtctttggggagtgattagaaacattagg
gtccagtttaaattccagaaaggaacgctctcttgttagcatggctggtgagatatcaat
cacagttcagttccccatgattctgacagagggctatgtggatgtaggagagaggcttct
aaaaaaaatagctgattatacatcagttatacatccttgagaaggagatgtgggagtggg
aagaaaatgatcaaaggaaaaatatttgtcatttcttgaaagtgtgatatttcttggaat
tcttcatgtaaagagtgaggttgaaggggatatatatttttagaggctgaaagtaatttt
ttttctagaattttcagtttatatgttttacatgccagggtagggctcatttgatttccc
aacagatctttccacataatgatattatagaatactatttttcctcccctaatggtgaag
aaagataaaaccatttggaatcttataggcctaagtttgaatattgactttaatttacca
gtgtttgaatgtgaaaaatattacattctctgtgcttatgctttctagtttataaaatga
ggaaaagtaaacctaactcataggatttgtatgttgactaaataaacactctatctctat
tattatagtacttcacgtttagcaagtgagtactgtgcactcaattttcttggcattcat
gtatttgatctattaaataatacaacataggtacagatctagcatatactatctactgta
taagcgcaagctataatcaattccgatttacctgtggtgatttaatctgtttctaaatta
attctgttttgaagaatagcaaattttttagaataaataaagttagaaaaaaattagtgt
atacacctatgtataaaaatatattccattgcttggagatgccattttgccaaaagctaa
tatgcttctgtttaccaatctggtatggaacctagtaactaaaaaataagatgtcaagca
aaatataaactggttaatattaaacaaaggctaacattatattaacgagaaaaatgcatt
ataaaaataacttaaattttaatatagaatagaatacaatttaatattaaatatagtaag
tattttatagccttttctattttgaaaaacataaaaacaaaaattgaaataatcttcata
cattcagaaggcaatgctagataaatttatttaaaaatgatgtattaaacacaaagtaac
tcatgaatatgaaaaccttttaatggaattttttaacagaatggtaaatttggtatatat
tttgggtggtttgtcaaattcatacaattcatagaagaatatggaatttgaggcaattaa
gttatggtaggtctcatttattacctgctaacagtcataaaacgtcatttctctgacttc
ccaggggagagacattgatggattctaagacaaattttcctttctgaggaaaagaaaggt
gcaagaacaccaccattcctttcctgtctggaccatttgcattttataacaaaatacaat
tgtgtgagaatatgataatgccaagaccagcaatatgaaaaaaacaagcccaaatacaaa
atgtattctattaaaatcagcaaagatattaaatgcaagtccacacatagtcaagtgaat
gcttggaaatgttggaacagcttacatccttaatcaGGTTGAGATGTTGAAACAACCA
Primer
(+)CACCGGATTACAAAAATGGGCAGAA
(+)TGGTTGTTTCAACATCTCAACC


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