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Human element [ hs1981 ]


Position: chr10:94,209,470-94,213,084 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MARK2P9 - KIF11

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GCAAAGAGAAAGAAGACAAAGGccagacttccctctgagtgacggaaaattccttatcac
atactgaccttgttattagaagacacttgatgcagtatttaggggtaaggagtcataaca
tctgcaacttactctcaaatgatttggcaaaacacacacgtgcgcacgcacacatacaca
cataagagagagaacggacaggatatgaaacaaacaacattggtcaatacagggggaagg
gtatatgggaattcactggactatttcaacaacttttctgtagattaaacacttttcaat
atataaagttaaataatatattcatattccataacctggcaatttaagggaataatcaga
aaatcacacacatactctgcacaagaaagtttatcacagatcagaacttgaaaacaccgt
aaaacccccacagaggattcaataaacaaacaatacgataccaaagagccgccgccgaca
acgacaacaacaacaacaacaacaacaacaacaaaagacatacttttttcaagggtatcc
atgtggaaaatgctcagtataaataggctactgaggggaagagttcccacactgagtacg
tgaccccttcctatatgcacaggaagaagactgcagagaaacaccatgcaagcagtggct
gtctctgtggtggtgtcacaagtgaaaatgactcttcctcacactcctcttccaaacttt
ttttttttttttttttaagacagagtctcactctgtcacccaggctggagtgcagtgcca
cgatctcagctcactgcaacctccgctctctgcaacctccgcctcccaggttcaagcgat
tctcttgcctcagcctcctgagtagcctgccaccacacccggctaactttgtatttttag
tagagatggggtttcaccatgttggccaggctggtcttgaactcctgaccaggtgggtga
gtgatccacccacctcagcctcccaaagtgctgggattacaagcatgagccaccatgcct
ggcctcttccaaacttcttgaaagatcctagaaactatcactccagagcaataggaaaaa
gagcttacactggtttaagacctggattacccccaaaaggaagggaaggagattctgcag
gcagtagtgacaactggtctcaaagtagcctggcgaagtggactgtgtaagactgtgaga
tctggtctcatgccccccaaaataggcaaggttaagagatcaagtaagacagtaaatgag
aaaaaggtaaagttatatacacatgtaaaagcaactgtctatttgttttacaaggatgtt
catcggcttggaagctattactacaggaaatccacatggtacaatgagatctaaagtcca
aagagctgagtggaggtttgaatctgcttcctggatgatcctgggcaaactattcagcct
ttctgagcctatttccacctctgaaaatctgggatgatgaaattttttatcactatcctc
cctgttgaaagactgtgggctgggtgcagtggctcatgcctgtaatcccagcactttagg
aggccaaggcgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggc
aaaactccatctctactaaaaatacaaaaaattagtagagcgcagtggcgcgcacaggta
atcccagctactccagaggctgaggcaggagaatcgctggaacccaggaggcgggggttg
cagtgagccaagatcgcacgactgcactgtagcctggctgacagagcgagactctgtctc
aaaaaaaaacaaaaacaaaaaccctaaaaaacaacagggggacctgctgagtcccctgag
tccctccatgtatcatgaatgagaggacgactgtcccaactcataaatcctggagttgct
ctgttgctcttggcctctgtgtggggctgccacatcgtccctgagaacaatgctgactgt
gcgggctggaccactgtcctatgctggaaaagtgaggaacaagcagattcctcttgaaat
gcctgcctgagccaactggccactatatgagtagaaaaattattttgacagggatcaaga
agacagagattgaacaagatatctgcctaaactgcagctggagatgtggcaagaagatgt
aaggactcattgtagaggagagaaatattttttctatcctttttattttcatccctgtaa
gggcaggaacaaatctttctgggtttggagtcagtgacaatactcacagcaaggagtcca
acatcaaatactgagattcttgttttacaaaagtgatctattcttaaggttgtgaaattg
agtcttctatttgacaaaaatcattgttacccagaaacacttttaaaatgttaatataat
tcactgctttctgcattatgaacaatgaaagcaagaaatctggtcaaactgggatgttga
gaggtaggctgaggactggccactgtactatttcactaaaactggaaaaataatacaaat
gcagactccagaggtgaaattcaggcgatttattgtaaacaggataaccctagcactcca
ccatactggctgtgtcacatgctccctctttcacatcaactggtcaaaaaagaagacttt
cttaagaagcctcaggtaactaataacttagttccacaaatctcatttactaagcactgc
gtaaactgcagtatctggggtagtctgttattgctcatggactgcagcttggacccatct
aaatgaatccattagtatgcctgagtgatcaacagcagctctagatccaacctggaaatt
ggaaaatgctgacgcataccaaacaattgcaggttcatggaagactacatgagattgctc
tcagatctcttcatgtgtcattctcataaaaaagacacttaaatttcacccattttttaa
aaaagagctaaaagttactcaatagcacataattttccacataaaaggtaggtggatttt
tatttactagtacagtggtggatcggaacactcaggcctaatttcagatctgtcttgtat
atacttgcagtttaatgaaaagctgcatagtctacaaatacataaaaccagaaggaagtg
atgatttcacacaccttctgatggataaagacaggcttcatataaggaggttcttgaagg
tagggataaaaagatggttacagcaccacattgatctgacagtagaaatggagccccgct
tttgaaagcagccccatagttgtgactatatcgttcttgcccaaaattgagatttggaaa
atggcaaatgtaaaaacttaagatgtgaaaaggtatgactttacagaagaaagtcctagc
caatcaaatcatatggggaggtaaaatgtccttcaaaaatgccattctttactttgcctg
agttagtggatgacagggccacttactgttactagtgcttgtatatggaaatatattcac
aatttctcttgaagcaagttttaataacagtaaatatttcaaaacagctgttaaatctac
agtaacaatttcacctaaaatagtatctcatgaaaaaaatatttttttaaAAGTCTACTC
CAGTCATCATCTGTG
Primer
(+)GCAAAGAGAAAGAAGACAAAGG
(+)CACAGATGATGACTGGAGTAGACTT


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