Human element [ hs1977 ]
Position: chr11:17,434,517-17,436,675 (UCSC browser)
Source: Lawrence Berkeley National Laboratory
Flanking genes:
ABCC8(intragenic)
Timepoints:
e11.5
Reproducible staining in pancreas as published in:
Parker SC, Stitzel ML, Taylor DL, Orozco JM, Erdos MR, Akiyama JA, van Bueren KL, Chines PS, Narisu N; NISC Comparative Sequencing Program, Black BL, Visel A, Pennacchio LA, Collins FS. 2014. Chromatin stretch enhancer states drive cell-specific gene regulation and harbor human disease risk variants. Proc Natl Acad Sci U S A, 110(44).
Expression Pattern
| pancreas (10 out of 14 embryos) |
Embryo 1
|
| Embryo 2
|
| Embryo 5
|
| Embryo 6
|
| Embryo 7
|
| Embryo 8
|
| Embryo 10
|
|
Fasta sequence
GGGACCATCTGACCAGTACAAacaaagacagaggcagcagggattaaaatcacacaaaag
gaggacagtcacaggagaatcctgttcgtctaagcttgtggaggggaccccatctggagg
atgaacaggaacaatacaaccccaggctgagcacagtgctgtgtgggctctcagtgtata
cctggggtgcaaatgaagaagatccccagcctgggagggcactaagctgaccttgccctc
caagcaggactgaaaacctgtcaaaggacatcatcaagaacaacatgtttgaccttactg
caggcaactcttcagccttcaatgtctcctatttcctagttacccattgtcctgagtagt
gtctcagggcatggtaggttgggggtcctggctttgaaaaaacccctcagaggctgctac
taacccgttccccaatctgggtctggtctccatggggcaggatgtcgatgtctggctgca
gagagcaggcttcaatgaccatcttgtacctggcgtgggtagaggcaggggatgcagctg
gtcagcctggtcagagttggcccgagcacttgcagagggtcattagtctctgggtagcta
tgcccagggtgagcaatggctttaataggcctcccgcttgggtgcaagcaaacaccgtgt
gagcttgaaaagagctgaggtcagcacttcacacagcgtttgggcaggttaaatactaga
aggatggaattggttgggaacaaatatgcagagtaagtgatgaaagggcgctcatgatct
ctgtgcagtgggaaaagctgcagccggaacccgtgcttggggcactgcagggaaaaccac
tgctggttggtttaggcagtaatgatgatggctggtcaaatatttgcccagcctgttcct
ctcatacttccccagccagcccttagcctgggcaggtgccagccagagttcatggaggca
tcagagtatgttggtgacaaacatgtacttaggtgttaggcagctttggatttgagaccc
atcttggtcacttactggctgggtggccttgggacctttctgaaacttggttcttcatct
gtagagtgggaataacaataatatctacctactgaggttgttgtaagcatgagaggaaat
tccgtgtacaaagagctcggcactgtgcctggtatgtagtaagagcgcagtcgatgctag
ccctaactattatcattggagggaaaatagtgcaggagccaggcgaatggagactcacag
agagagctagctagccctcccaccagctagagaaaaggcagcggggctctctcccttccc
tccattcctgccctctcccctatgggagctggattgccccaatgctcaggcacacctggc
ccctctccaggtgcaccatatggagaggctggagtgcaggtaagcacctggggagtgaga
tggctgggtgtgggtgatcgatggaggggcccggaactggggcaggctggccagagacag
ttcctcccctccacatcctgcctccctccgacaggcttttaccgttgtttgttgaaggga
ctctcaaagatgatgttctcctccacagtggcatttagcagccatggtttctgcgaagca
taggccacggggcctctcttcctggaaaaagcagggcgggagtagggggtgcggaaggca
ttctcaggggcttgttctcagaggcagttgtcaagctgatggctcagatggaggcaaggg
gatggggaggtgcagttggtagaaatctgcttagtgtggcctctggtggccttgccttcc
cccaggcaggtttgagaggtctgggtctcaactgactggggcagcaggacctcatcccct
ccctgccctacacccagcctgccccagccctgcagtctgttgttccttagtcagggagga
gcccaaaagtgtgaccaaaccaagggaacactcaacttctggcttcctccctctttgggt
agccctcaagccactggactttgaagtcagcaggtaattctccaaatggaagaacttttt
tttttttttttaaaagcagagccaaggaagccacattttgagtgatgtggtttttgaaga
aaaaagaaaaagagatcccagataaaaatgatcttatgTGAAGGGAGTAAATGGATGCA
Primer
(+)GGGACCATCTGACCAGTACAA |
(+)TGCATCCATTTACTCCCTTCA |
|
