Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs1971 ]


Position: chr20:56,014,710-56,019,293 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: RBM38 - CTCFL

Timepoints:
e11.5

Expression Pattern
heart (10 out of 10 embryos) 

Embryo 1

Embryo 2

Embryo 3

Embryo 4

Embryo 5

Embryo 6

Embryo 10

Fasta sequence
ttCCTGGGAAGCCTGACTTTCAGTtctaaaactgggaaggtcccgggcaaagctgggtga
gttggtcaccatggcagcagaaaacctgagcgggatgggggtggggcagtagaagggaca
gcagggagtcagggccaggatcagccacccgggacaatgtgctgcccctccagcaccaga
cagaaccgagggaggatccctgtccccctcccacatcactgattctgggagccttagttt
ccattttggtaaactgatgctagagattccccgcctcacagggatgagggatggggaact
gggtgaggaaatgagcatagagcacttagcagatgcagacatgtgattcatgggggatca
cattattaggtctccggcttcaaacccagcttcccgctgctcagaataaaatgtgacacc
ccacagaccctggaagcacctgcgatctcagaccgaatctccccaactccactgctcact
ctgctccagccctgtgggcctcctggctgcctgagattgggccaggcctcgccctacccc
agggcctttgcacacgctgtttcctctgcctggagcaccatgctcttccccctctcatct
ttgggcctcagcttcaaggtcactacacagagaggccttctttgtccctcttatttgaag
gaatatctgtctccttggggaacagtcatctcttggccggttgagtggctgccctgggcc
tggtatggtgccccacccagatcaaagctcaggatgtggtcgtggagtggaagaataaat
gaatattgacctgtggaggtcccaatgggctggagaaagagcccagtgtcttaaatctct
ttcctcctctgagcctcgatttcctcatctgtcagcaggcatgagaggagcatctgagtc
cttggtctctgtgaggcatgaatgaggggacagagatgaagtctgttcagtgcacttggc
cagcagcaggactcggggcctggcagctcccctgatggcaccctgggggcactcctcccc
actgtttcctccctgaggcctgaggaccccatgggcggtgggtgctgctccacgctccac
acagaccaggaagccaagcttggggccacccccactgccttctcccgggcaccactgccc
acggctggcctctcctcaggccacaggtctggcctggctgcccgaactctcagcctggag
gcagctgaagcgtcacatgcccttggccagccgtctccgggggggcgggttcccctcggg
agacttcagcacattgtcaaagctgtcaaacaatttccctgccaggtttttgcaggaatc
caaggcctcgctcccaatgccaaacaccctcttaagacgatatctccggggcctgcaggc
ctgctcagcggcgctgcctctcctcggccttatatagtcaaaagccggggaatccctgtc
ccaccctgggctgggatctgatggaagctgccacagccttggcctgaccccgggatctcc
cgcctccaaatcggccatctctggccaaggggccgggtgagaggcctggcatgcgcacag
gcctgcgcggggctctgggtgtcccatcagctggcagctggagcggccaggccagcacag
gctcttaccaaataaggcctgggcagctgggcttggccaggctcagacggcggcagctgg
gccagcagtagcaggcctgcctgtctcctcctcccgcactgccctgcctgcccagcaaag
actctgcagactgtggtcccctcgactcaagggagagctccaccctaagaagcctgggta
gacggtcccggatcccctgccagacgcgctgccatgaggaacctctggcaaatttccatt
gggaaccttgagggaaggcaaggtggagaaacattcctaggactcccgctgctgcaacgg
gagccccgagccaggccaagaaatgacctgtccctcccccaggaccccgctcccactcct
gcatcccccagggtgttccgatttggatgttgcttgtcccaccagtcagccccttcctgg
tgcctggtctttggggccaaagggcaaggctggccaagcggtttgggaagcgggcccggg
ctcaggagcacactgagggcccttgggcagtgacctgccctccaactgtggctatgatga
ggaaggcgcatgcgtgctggttgaggagggaagacccccatgaccatgagccagtgtggg
cagaggaatgggcagggggaggggcagggggcaggtcctcccttaggagccactacgggg
catgaggctcctgtgtctgctcgccttggttccagccagcagctttggctcttggagcct
cagttttgctatccttaaaatgggtgtgatacaaacgctatctcagggtggcagcgggag
ttcaaggggacaagatgcacacctctcagggccctgcagggagttcctggaagattgaca
gcagggcgagggagggatctctcctttcctcggagatgggggaggcaagggctctctttc
tgtccctgacaccccctcctcagctcctcctgccctccctgctgtctcattatcttaggt
gtgatgggggcatggtgaggcctcccagccactcccagtgctggaagtgcaggcgtgggg
tgaccagctattgcacatgtgactgcatggctgtgtgtgtacgcatgtccctcccaaccc
ctattagcacaaccatgggaacgtgaccgtgcagcccaacagccagggcgcgggatactc
gagagggtggccccggcctggggatgtctgtggttctgctgctgctcatttctgaagccc
cttcatgagttctgggactcctggggggatggggcccacttatgagtccctcagaggcat
tcagtgcaaagtaaaaatgtggccccccctccaaacgttcaaaaacgacgaagactttta
agacgacaacagcagagcattaaaccaacaggcggcccttctgagtgtgagggtccctct
gcgactgcacaggtcacaccccatgcagccggccctgtcccctctgcccctctgcagctc
aggtgggcggggcctgaccactccagcctggtcactccagcctggccttagactctgagg
tgagtggtgccaggacctgccggtcagcctggattcatcatagcctctgttgtccagtag
gcttggcaagaagggtctgtggaagtttataaaagtgacaccccccagcccccaacctgg
ggagcagccaggagccctatgtcagaatgtgcggcccctaatgaaagtgctcttccagcc
actctatttaagccaggtgagtttgttctcagggactggaggccggcaaggtaatgcagc
tgtttttagcgttttagcaggaggcaggtgctggccaggacgcctgtgacgctgtgggtg
acgatggccatgacccggacacatacaggttgggcaacctgggcagagctggtgtgcctg
gaggtggggcggggggggtgcctggaagactggtgtggcctggatgtcctgagagcgcca
gaacctctccttggggctccctgggtggctaccacctttgactcttgccctaggggcaca
cactgccacctttccagaaagttctctgggatctacagaaactgaccacccatccaggtg
cttgaacgtgtcaactggtaacttgcagctgttctgttggaacctctgagattccaagca
gaattgctcagaaccttccggatgccccacatgacatccgctccctcagggatagacagg
gttcggctgctcatcggggtctcccagagcctggaacagcgctgtcctagaagccgtgaa
caaccatcctgcaaagctggagaagcagggcatttccccgctgacacgctcaggaccagg
agctggtgtgcgtcaaagtcagcaccaaggccggtccatggcctgtgaaatactcgtccc
tcaagattgcatttcaatggaaagactggcatttcccattcattcacctattttttgatg
gaggaaaaaggtctttctgagtggggtggggtgctctgctgcttggggtggtcccctcat
cttccttgcataacccacatctccagtgtatcttgtgcctttgcagtttctctttctttg
aaatggaagagagaaagaatatgctcccagagacggtaactggagagcttcggagcagac
ttttatactctaaagtaaacttgtccttttcattaattaactaacagagatttatttggt
gtggacctcacgccacagcctgtgctggatgctgagaacagaggaaaaatgagcccaggg
aaattgtgcctgagtgcagctaggtcagttttctgttttacaaatgcaggaaccaaggct
cagagagggtgtgtgaatcacctaaggccacacagcgcctgtgtgacaggctttggcctg
taaggggaaagccggctagaagagatgagaaaatggggtgtcattcaccagcaaaactgg
gttcaaatccgcctctgggaccttgggtaggaccggcctgccaaacacaaatgcatatct
gattGTTCCCCTACCCCATTTTGT
Primer
(+)caccTGGGAAGCCTGACTTTCAGT
(+)ACAAAATGGGGTAGGGGAAC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.