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Mouse element [ mm1966 ]


Position: chr13:15,188,525-15,193,540 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: AW209491 - Gli3

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGGAGGATACCAGAAGTTCGTTtgtatatcccagacattgaaacaagaagatattatgtt
gaagttgcgttggagaccccaagattttttagatggcagagctgtggactatctgctgag
gaaagctgctaaccaggtaatagcccctcataggctctcttcatgataccaagcctcaac
tcctttgtatgacccccttctgtcctgggccatcaaatgcaactgaggctgtaccttcaa
ctatggccttctatggcctttcatagtgccaagcctcagctgttcttcatgaccccttca
tgccttcaaaaccagtaacacctggatggaaccagcctaagagaaagaacttcactgaaa
tcaacagagatgaaaaaggaagtgaaaatctgaagatggctttcatgtcagacaaagaga
tgcagagcttggtgtttgcccagctgatttactgtcttgctttggggattacagttaagt
gattggatagatatcagagcagacattgaactttgtgcttttaacattgttgagactcct
atagactatggggacttttgaagttggactaactgtattttgtccataaattatgccatg
tttaggtagggccccaatagactcatatgtttgaacaagcttataggagccagggagtgg
aatgttatggtttgtatatgctctgcgcagagactggcatgattagtacctgtggtcctg
ttgaagtaggtgtgtcactgagtgtgggctttaatacctcatcttcgcttcctggaagcc
agtattctgctggcagccttcggataaaaatatagaactctcagctcctcctgtatcata
cctgcctggatgctgccatgttctcaccttgatgataatggactaaatctctgaacatgt
aagccagccccaattaaatgttgtccttataagagttgccttggaaccaacatactggga
aaagatctttaccagtcctaaatctcatagagggccaatatccagtatatacaaagaact
caagaagttagactccagagaaccaaataaccctatttaaaaaatggggtgcagagctaa
acaaagaattttcaactgaggaataccgcatggctgaaaagcactttaaaaaatgttcaa
cgtccttagtcatcaggggaaatgcaaatcaaaacaaccctgagattctacctcacacca
agtcagaatgggtaagatcaaaaaactcaggtgacagcaaatgctggtgagtatgtggag
aaagaggaacactcctccattgatggtgggattgcaagctggtacaaccactctggaaat
cattctgctgcttcctcagaaaattggacatagtactacttcaggacctagctatatcac
tccctggcataaagccaaaagatgttccaacatataagaatgacacatgctctattatgc
tcatagcagccttatttataatagccagaagttggaaagaacccagatgtccctcaacag
aggaatggattcagaaaatgtggtacatttacacaatggagtactactcagctattaaaa
acaatgacttcatgaaattcacaggcaaatggatggaactagaaaatatcatcctgagtg
aagtaacccaatcacaaaagaagacatatggtatgtactcagtgataagtggaattagcc
caaaagctcaggacacccaatacacaattcacagaccacatgaagctcaagaaggaagac
caaagtttgcatgcttcagtcctttttaaaagagggaacaaaatactcacaggaggcaat
tcagagactgccccacctggggatccatcccatatacaatcaccaaacccagacactatt
gtggatgccaacaagaactttctgacaggagcctgatatagctgtctcttgagaggctct
gctagtgcctgacaaatacagaagtggatgctcacagccatccattggatggagcatagg
gtccccaatggaggagctagaaaatgtacccaaggagctgaaggggtttgcagccccaca
ggaggaacaaagatatgaactaaccatacccccagagtttcctgggactaaaccaccaac
caaagaaaacatatggtcagactcttggctctagcttcatacctaatagaggatggtgta
gtcggtcatcaatgggaggaaggtcctttgctcttacacgcgttcgctaccggccaggaa
agaacacaacaaaccggaatcttctgtggcaaagctttattgcttacatcttcaggagcc
agagagcaagagagcaagagcaagaaagcaagaaaaagaacaagaacaagaaagcaagag
agagaaaaagaacaagaacaagaaagcaagagagcaagaatgagaaaacaagagagagaa
aaagcaagaacaagagagagaaaaagcatggcaaaaccccgtcccttttaaggagaatta
tcctccgcctaggacgtattactccctgaatggctgcagcccatcggcccagttgtcatc
acgagaaaggcagaacacatggcgggaaaactgcccctgcacgtgtgcagattatgttta
ccacttagaacacagctgtcagcgccatcttataatggcaaatgtgagggcggctcccaa
catctcccccttttcttttaataagagcaataggccacccatattaatgagagtggagat
agaggtcaaatccccagtgtgcaggtaaaggagccatgtacaggattagctcttaggctc
acaggcttttacccagagcaaccctgacctgctcccgtgtcgtttttcctggggagaagg
acacttggacactcaaccttcttgaaagatgacatgtctccctagaataggctcatatat
gccgcagagcccttctattgcagggcttagccgtgcaactctctcgggctgctgaagcac
actcactctatcccgtgcaatgagactagcctcatggggtgcaagagctgaatggccagc
gacctattgcttaagcatagatatatcaggggaagcaccatgttctagtactgcaagtgc
ctgggcaataaccaccttgtctctcctagtttgggccttaagcttacagaccaaccaaag
aagcaactctaatccacagcaaagtatatctccaaataatatcaatcccacccattcttt
aaagaaggaaaatgctgaggagatccaattgggtaatcctttgatcagggacaggtccaa
gcacgtggagttgacctgaatgatggcaagtctcaattcctgaagggtctgttcaaattc
agccgtccaattctgtaacatatactgagaaagactttttgacaaattagctgccctagt
aaatttctcatactgaatggaagtaacgcataatgagaggtcccccaagctcccgacaaa
ccctgagccagttttgtaaacctttgttctttcttggggctatggccgctctgcattcct
gcgtggcttgctcataaataagctattctaccagaggtgcggcttgctctgaatctccaa
aaatacgctctgctgcctctgtcattctggccacaaaatctgagaatgactcctgaggtc
cctggacgatctttgttagttgtccagtggcttcacctgctccggagagcgccttccagg
ccctaatagccttttcatctgattcagaactattaagaactggctccttgagctcatcta
gtgatgagtataggctccttctcctagagacctccgctgattgatcttttttcttttctt
tttccttctccttccttccaatctctccccaggtattcttacctgaccttaacttttcct
caggttcaagacccgtggaaaggcctgtatacttattttgtgttccatatttcctctttg
ctcctactctctctccccgctttacttctgatagattgccttgaatttcatccagaattt
tcagcccttccttaaccacttgataacatgtgaaaaggaacaaaagggctcctaacacta
gaaaaagttcaaggccaaacataccttgtaaagctatttcccactttacttctgatagac
tgtcttgaatttcgttagaaagttcaagaccagacttaccttgtaaagctatttcccact
ttacttctgatagactgtcttgaatttcgttagaaagttcaaggccagacttaccttgta
aagctatttcccactttacttctgatagactgtcttgaatttcgttagaaagttcaagac
cagacttaccttgtaaagctatacttacgggtaccctgttccccagctgaagagttctga
attcacgcagttgaatccttctcaacagtctgttttacgggaaccttcattaccataacc
cgcagttctggttccggaatgagggatcttccttgcgccggtgatggttaactcccgtcc
cgagtttttcttcccgggtttccggcaccaactcttacacgcgttctcacgaccggccag
gaaagaacacaacaaaccggaatcttctgcggcaaagctttattgcttacatcttcagga
gccagagagcaagagagcaagagcaagaaagcaagaaaaagaacaagaacaagaaagcaa
gagagagaaaaagaacaagaacaagaaagcaagagagcaagaatgagaaaacaagagaga
gaaaaagcaagaacaagagagagaaaaagcatggcaaaacccgtcccttttaaggagaat
tatcctccgcctaggacgtattactccctgattggctgcagcccatcggcccagttgtca
tcacgagaaaggcagaacacatggcgggaaaactgcccctgcacgtgtgcagattaagtt
taccacttagaacacagctgtcagcgccatcttataatggcaaatgtgagggtggctccc
aacactttgccccaggggaatgccagggccaggaagcaagagtgggtgagttggtgagca
gggggagaggggagAGAATAGGAGGTTTTTGGAGGG
Primer
(+)TGGAGGATACCAGAAGTTCGTT
(+)CCCTCCAAAAACCTCCTATTCT


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