Mouse element [ mm1955 ]Position: chr13:15,057,864-15,062,616 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: AW209491 - Gli3 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence CAAGGAGCTTCCAGTGTACCAGgctgtgactttatatatttacctcctgttaaagtcatt tccatgtccgcttcatacctaggaagactaatattttaattgttatctgcaggtttgcat agcaatattctcccacaactggcccagttatgtttctttcttctattcctttagaggttg ctttcagtaacatgcatttgaacacttttctctcaagtactaatggttcttaaatgatgt tcacgtgcctctgcttgacactgctaggtgtgactcttctcaagctggctcactgtctaa gttgtccaggacctgatgttgtatgagccttgtatttagtccaggactgggttagtgtac atactttgggatctggccattgtaaagatgaaactggaccaagtgattccagcccacatg tcttctagccttcacattcccatacagaccaaatgggcttttcctatagtgtttaaattt tatttagtttaatgaagtggtaactgctgtctgtatctaaagggacatatttctagggta atgttttatatttgaccttcctaagaaggcatcatcactctcaatgtcactcatcaatga ctctcatagatgtggactcctcagttacagactcagttcaggcaaagtagagaagaatgc tggagtcaagtgtcagtggcaaactctgtttcactgttggaaggaaaagtgaagaatgca gctgccaaaatcattgatagcagacagcaggctgcagttaacccagccctaatactgagc ttaaacaaagaacacaagatggtgtgatactggacacagcaaaattctcactttgacacc aaaacaatcttctttttgttgcagagttttatgactgtgatgtcattgagcactgccaac aacagaactgttatatcacagatgaaaagctcttaaactaacgagggacaccattatgcc aagcctggtgtttgccataaaaatatgggtcactgaagtctgtggacttctgagctaaaa cctccaaggaaaagaactgtgaatttagagttcaatttagttgttttgatctggacatct ttatgagtagaaagaattaaattggccatatgtgaccttgtattttgaggaaatcaaatc attcaaacaagataattttgcctcttggccaacaacttcttttctcttcaactccaaggt tatgagtctctgcctgaatacattttactagcatttagtggattgtaattgttctattgt ttctctggttacaaactcaaaatgtattgcagacttcagctgaaatcattttctgcttta atccattgtgggagtgagaggcagatttcaacattcaaatctctgaagtcacagcaggca tttccccctgcattcatttgtccatctgtctatctgttctgcccttctgactacctgata aatattgagtatcaaatgcatataattgtggtagatggtgctaaatgaaatgtcaggaga aaatactgttccttgccctcctggagtttttatggctggcatgaaagatgcctataaaca ttctctctctctctctctctctctctctctctctctctctctctctctctctctctttct ctcctttctctctattctctctcttcttcttttcttcttcttttcttcttttcttctctt cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttccc ttccttctttttctcttttacatctttctattccttcttttcttcccttcttccttttcc ctccctccctctctctcttctctgtctctccactcttctacttctctctcagtaaattga aaacttttactatttgagttagctagagcctacatgggtggctgcagcctataaatgtct aaacaagcatccaaaactgtatacatgcttagacatccacatacatatgcaaatatattg tgtcaaaaacacattgcaattaaaaagctgtagctgctagccatggcatgggaagtcaga tatgggctctgggactcagtgggacttgcttgtctttgctgtctaccacatcctcatcta caggagcacttctccaaagcacatatttctatttctccaggatcttagttttagcttcac ctctgctcccctgttttctagagtatatatctttatgtgagacttttctaacaaaattac ataaacaagtaacagaagctttcagagtagtaaggaagttgccatgccactttggctcac ctttgtatatttagttaggaatggtgtgaactctgagagcatccttaaatgcctagctca aacatgtaatatttatttggctcattttgtaagatatgaagaatatcctcaaagctgaga cataatatagaactaacattgttataggagggcttgagcaaaatgtgtatgtcttcagga tttcctaattggaatatctctatgaaattttatttttgactatcttgagggggtgatgca gtattaattgttgtgaaattctgtgctttgtgtatcttcacttaggtattggtttttgca gcaggatctaatttctcacagataaaggctatctgcttatgacaacactggaaaaatcta acagggttagatcggaattgttctgtttaatgaatatgtgaattggcaaggtctgggctg tacaaaaaccattaatttttctacactttaaccaaattttggcttttaagattttcacag ccaacatgtcaaaaatcaagccatccctatatcatacctttcaactgatattttagaatt tgatctgggttctgtaagacagctcagtagataaaagttcttgccatacaagccttagaa cccaagtttgatctttgatacccactatctttggcaagaattgatgttgttttcttgaac tctgcacatgctacatagaacatgtatattcacatacatatgcatacacatgtactgtct tagtgacagaataccatgaccaaatcaacttgggaagaaaaggatttattcagtttaagc ttaccaatcataaaatgaagtcatcacaggaactcaaacagggaaggagcccagagctag gagctggatgagtactgtttactgacttgatcctcatagtttttacaacctacattcttg tagaatacaggaccaccagcgcagggataacaccacctataatggggtgggtcctccacc aataagtcgctaataaacaaaatggtttataagcttgccttacagcctgatcttatggag gcttccttctctctgatgagtctagtatgtgaagtgtaaaactagccagtactaacttta aaagatatttctataaaattgatctaaaatgccatgtttaggtccattatatggcttgat gtatagttgactggtagagaatgaaggatcatgttaggggaatagataaagaaagtgaat ttcacattttgattttacttgacatgtgagggctctcaaagaaaggatggtaatctgaga acagtttgcctgaaagaatttcagaaattcatattgccattgaaattggtcttatgtccc tttttgtgaccgctccatagcctcagaaatggtgttaggccttggaacttccccatgagc tggattccactttgggcctgtcactggaccttctttttctcaggctcctctccatttcca tccctgtaattctttcagacaggaacaattatggatcagagttttgactgtgggatggca accacttccctcacttgatgcctgacttcctgctggaggtgggctctataagttacttct ccctactgttggacatttcatctaaagtccctcactttgagtcctaagggtctttcacct accaggtctctggtgcactctggaggtccatacaacctcctacctctcaagatttcctgt ttctcttctttctgttggctctcagggcttcagtcgtttttcttcacacaataccagatc aggctccccactcttccctactcccctacccattcactttcctcccatgtctttccaccc cttcccaattgcgattgctttcttttccctctcaagtgggactaaggtgtcctcacttgg gcacttcagcctgttgacctttttgagttctgtggactgtagcttgggtattctgtactt ttcttccttccttccttccttcctatcttttttttctttcttccttccttccttcctttc tttctttctttctttctttctttctttctttctttctgttgttgttattgttttgttaat atccacttcttagtgagtgcattccttgcatgtccttttgggtcttgaattatattccag ttattctttctctgaaaacaagagaaagatgtcatatagtaaataatgctgattaccaac tcaacttatgtgcacatacatattatatgtacaggatgttttgctatatgcatttggttt tcttgatttaacttaaaaatccaaatttttcaacttcataaataatgtgattgaagatca ctgtgaaacactttatagagtgtgtgggttggggaacagggcagggggagagtataggtg tcttttgggatagcatttgaaatgtaaatgaagaaaatatctaataaaattgtttagaaa aaagaaaaaaaaggaatatatttcttttctacattcttcctaataagaaaaGAAAGGCAA GTGAAACAATTCCPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.