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Human element [ hs1953 ]


Position: chr4:140,682,864-140,686,286 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MAML3(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CcCCTCAACAGATGCCTGTGAAacggtgaggcaagtgcagtgatagagattagcacgggg
gactctggaatcacaaaagaagctcaactaacccagcctggctgggtcaaggggagtcag
ggagagttttctccgggagtagatcctggaagctgtgtgggaattggttaatgtgttaga
ggaagagggacaacatgagcaaagtaatgaaggtaaagaacagccctgtggacaagcagt
tctatattgctggattgtgaagcatagggcatgagacaggaagaagtcaggctagagagg
ttggatggaccgagagcccagggagcccagtgtgggtttctaggagcttctatgccacat
gcagaaacttgcatggatgaaggactcttgttcgagctgcagaatcctaactagtccctg
gcctctagaaaatatttgtgcaattgtatgtttcattaccatgcatgtcctctgttccat
gagtgcagggccttgtccatctaattcatcactatatcccccgtgtctagcccagcgcct
gggacacaataggtgactaaaaaggaagaatgggaacagaaaggatgcagcttcacaggg
tttttgtgaggcttcctaaggtgctatatgtagcatgcttagagcacttggccctagcat
gcatgaataagggacagtgattgtgattatcattcatttgcatttctttttctcctgtct
tgttgatttttcaagcccactgcttatagtacctttgcttttgtggctggccctgattaa
tacattttgatgagtaatagtgtttgccaaatgataacggtccccaaagaggcccccaac
ctacagagagttacagaaatattcagcatcataaaccaaaaaaggatattcaaaggacag
aatcgaggaactgatttcctcaatgggaatacaaaacttatgtttgcaggcaggcctcct
cgagaaagtatgcaagtgtcacatgaggctccatcgctacactcatggccaaaactttaa
cccccgtgaaccctggataaaaggcaggtagaaatggttgagaataaactgttctctgta
gacctcgttgaccctaacaaccatctgacggggctttaatctggtggggtgtggccaggc
acagcccatggaggaaagaaagcccccctttctttcctgaggagggctggagagggggtg
cgtgtgcatatttcgtgtctatgtgccaaagttaggcttcctgacattgtttcctctggc
ttctcttggcacagtgtcttcctggtctatgaaggcctgcaactggctgatcttggttaa
agggaaactgaccagtggtatttggtggatactgcttgtcctaaagattcaggaggaata
gaactttctccaggaacccagggacttatccagggatgacaatctaactttttagggtct
gattgaaagatctgcatccttgtggacaagaacttaactctacagaggagattcctcctg
ccacaggattacacctggaaagattttaacattcttttcctttgtcaagtccccaaagga
tacattcctgatagggaatcctagagtttattctcccttgaatgactaaggccctaggca
aagctgaagaggagtctggattctgtgagaatgaacaaggcagctgctcggagtcggctg
ctgagggggccatctgtttaagcaacgagaagtacggagctaaagaggcacacggtattc
aaacatgtgagttccctgcaccagggcttctggtcagttcttcaatcaggagagaaaatg
atgcttaggtgttaaaggttcagggggagccgaaatgacttcaattgccaaaataaacag
aattgcttaattaatctaactaaaaaatcctgttcagcattggattaaaaaaatcatgtt
gatgctgcccctgtttatttggctgaatcctggactgagagggtatatttagcctcagtg
tgcttgcaggattgcatcttgcagctcaacaggaaatatctggagtcacagctaaagata
tctctgcatgttcagaaatttacgagcagctgtaaaagtggagctatggtgggcagagtg
ctggaacagtctccctttcaaatgagagaggccgctgaattaaacacttgaatataccaa
gttcatggcaggcagagggcacctgacatgctaaaaatagccaaagtggaagtgcttctg
ttgctaaaataatactgaactggtatgctccttttctcaacccacaagaaatgggtgaag
gggtagagggtaggctctgagattccaaaaagtgtgtcagaagctatgccaagtgaaagt
catttcctcattttgccacttttcaaaaataaatagctttcttaagctgagcaaactgaa
gtagcagtaatcaatatattattttttaataacacgagacagaaatggtagcagcaaaaa
gacactgcatacctggatctgtagtcctgctgacaagcaatcctgctgacgagcaaacct
tttccatcatgggcaagactcatttatttttaaacatccttttgctagactcccttatca
gcaactccacgccctgctcaccaatgcccggctggaaaggtccctacttactcctgtgca
catgcctggcaaggctgcttgctaaacagcatggacaaggggacgtctgtgcccctgcat
gttgccgggcagaggaggctacgaccttttcccgaatggccattaggtccaagagccact
gaactttcattctgtgaccgaggacattgtctcatctttccaagtctcacttgccctttt
gcctgatgtggggctaatagagattaccctggtggcctcctgaagttgctgtgcagatct
agtgagctaatgcatgcgagagcactttgtgactcccaaaagcctgaaacctgatggagg
atgtggttgctgttgttattgggcattctactggaaacgcggggaaagaacagcaacatc
tcccggtgataagggagtgctgtgcacagacattgagtgtgttctcttttgtgggatggt
gccatcttccacaggtacaagcactgtccacatcccactgagagcagcaggggccacagg
aagtccgcttgctttcaatgagcttggcatggctcactgccggcatcgcggccacactcc
tgcttcagtgactgcacctactctgggcagctcccaatgcagggctgggcctgggttcac
ggggaagcaggggctgagacagaggtgagcccagcctcagtgtgaatggttatgaagtta
tcaccagtgcctaccctgggaccagtcccccaggctggtcagtactcctagctgggagga
gagagatgcctaccttatcttaggcagccccactaacagctgccGTTTGGGCTGCCACTG
ACT
Primer
(+)caCCTCAACAGATGCCTGTGAA
(+)AGTCAGTGGCAGCCCAAAC


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