Mouse element [ mm1951 ]Position: chr13:15,071,617-15,075,958 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: AW209491 - Gli3 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence GTGCTAGAGCACCTCTCCAGTTtagtcttgacactgttttacttggcataacctcataaa attgccaacaaaaccaaaatttacaatggcttccacatgtgtatatgtgcgattctgggt ccagaagagtaggagttagaacaagaagaaagaaatgccatataaaacatctgagtcatt ctgacctgtgttcatatgagtggcacatttgtcttttctccgaccatttacaggaagaac tgccacatttcttggccagcttggatttatagcaacttttccttttgcctgtattcatga acgccagtgttttgcttagtattttagaccatgatccacttccaaacacctacccaatgt tagttctatagaaataacttataatcccagaacattactttctattacatatttggtttt taaatatcaaattaaaagcatttgtgaaaacaagaccatcaaatattggtggttttaata tttaggaataaatttctcatttgcttaagacattggatagtgcgtactgactaaggtatt gagataaacatttgcttactgaagtttacctatgacttcttaaacttcaccacctattaa ataaacacatggcaactcactcatcaattcatctaaccatgcactgataactatctgctt ggaatagactttttctttgctttggttatgaatatatgtattgatcaccagttatagctg ctgtaattcaggaaaatatcttgcttctccagggctgagaaagttatgactgctgtccaa acgtcttgtagtcagctacagctatatcaaggagagcaaagctcattgcccccatcactt ctattgtccttttaaatcaatatttggatgagtgtatccactaaaggtagtctaaaattt ctgagttggtgctgtaaatgtagaagattgatccaggcaaaataaagaggtttataataa aaatatgagagtagcttattctttaaaattacttgtgtgaaataaccctattcaaatgcg agtgctgagtacaagaaagggttcagaaggaatcttatcctttgattttggactagtcac aaaaaataataagggagattcgcactggggaggtaacttggctgtatatagaaaattaat aaatacctcttaactctgaaccagaagagccaagcttgggaatcaaatcctcctgaaggt caaccttttgcttctcatggataataggtggggcatgggtgtgtatagatactctcttag ttctgctgctatacatttccataactattttgaatttaatcttgaattactgtgagccgc accatttttcatcatatactttagtaactggtttattatatcccctaaatcaggaagaaa acctctcaaacttgtttattctatctgtatcttagctataatcaagtgacatgagccagg aggatggctgtggatggatattcctcacctctcacctcttacatctcccccttctctctt ctatccttttcttatttccccttccctcttcattcaccagaggcttttctatttgtagat tcaagagaagacatttaggaaacacttaataaacatattaggttctctgaacactcccaa gaagtgttatgatgtctcttgacataacttctctgaataagggataccagagtgatcatg atgatgtacaaaacctacactcctagtacccaccaaggatgtgcctttcttaggtcttgc tgagacgcatctgcactccaatcaattggcatgggcttaatgctttcccttactagacta accttaattctccttgagaacttctttctgctttaaaatccctattggttgtttgcagtt gccaggaaagttccattccttctcttcactcaggaaattcttactcacttaaaagtcaca cttctttaggaaaactttctgtaactttccttcagggctgtagccctagcttagagattc tataacatggttcttctttccttctggtgctcattgtctctataatgatatacttttaga tatgtcatcccttatttaaagtgtgttgactagaatctcctatgataaaagatactatga ctattttgcacatcacactatcttagcattgaacagaatgtctattcaaagtcaatacta aatgttacttgtataaaatatttttgtaacaaatattataaatggcaacaaacttataaa attacatttcccaatagaaatacatagatcctataaatatgtaaaaataaaatagttttt gagctggaaaatgcttattggtagcgtatgcacccctggcccaattcttagccacacaac aataaaagcaaggaaaaaataaagtaaaaactattgctagtattcaaattaactatggta aaaagaaacaggtaagaggtctcaattcttggtacattaaactcatcctattcaaccttt ctttcactttctcttccttccttccttctttccttccttccctccttccttccttccttc cttccttccttccttccttccttccttccttccttatttctttcctttctttctttcaat ctgaacataattaacataatttacatagattataaaatctagccatgattctgagacttg ttaaagcatctacaaaagaaaaaatagcagaaataatggggaagtatactggtgtcattg aactttatattctctttccatcagtgtttcatagtctttccttcatacttcctccaaaca tagaataaaacatcaggacagagagagataagagaagggagagagagagagagagagaga gagagagagagagagagagagagagagagagagggagagagagagagagggagagagaga gagagagagaggaagatcgacaatgaggatgataatgaagaatgaatgaacaaaagaaaa ttgaatgttctaagagggggaccaagctatggcctaaggagcttggaaagtaaacttcta aataacatgtgtataaattatgatcccctctcttgtaacagtccccccaaattccaaagc agcagaaatgttaacttatagcaagaacataaaggaactgactctgtagaagtcagagtt ctgagtgttggtatgagtttttcttttgtatttttgttgtgtgtgcacatgcattaggca agtaagtatctttgtttatttcctctttaattaacttatataatataatgtgcatgactt tacattgcagtagataagtggttttaacctcattacgtagtaggcaggatatttttatat tgctttgggaaaagaatcagtacattttgtttggtatatcatgttagattgaagtataac cttatttttgcctttatttagactttaattgtgacttaagaagatatatataagtgcctg gtaaacaagtaatggtttgtgatgtttaattttacatatatgcttagcttagccacaata accaggcatgtcaccatttactgtgaaagtgatttcttgggagagattaacttctaatcc agtagagttcaaggtagcagatcatatgtgaaagtgtatgagtcatctttaatacagtta gctgaaggctttaaaaaatacatacatggactccttgaaagcgtgttgtcatgccttccc ccacaaaatactgctttatatttgaaatagaaattagttccttcatggatttccagcttg tcaacctgccctgggatttagacaagccaatcacacagtcactgaaccaatgtcttaaaa taaaacagaatacattcgtatactgatttctctgtagaaccctggatagtgtaaaaagtg gacagacagatatctctatccagtaaaactgcagttgcaagaaagatgtaaatctccact gccctttttcttcctttcctcccattggctggcctctacctggttgaatacaaagctgag aagtgtctagtgttagaagaaaatatacatgcaccagaattggaaagtgctgaggaaacc acaacgataaaactctcaaatccacttgtcccccaaaattgcttataatttgggggaggc taggcacaaatgagcatgatcttaattggcatccaaatcctttgagaactatgaagagac cactatccaaaacatagaatctagtctgaaatgtgcataccaaaacctaatatgaagaac tctataaaatctttagctattaccctgacatgggaaccaatgtccacagaaagtgggttg aaactctcaaacttatccatacaagttcaactctcttatgtctccaaaatagacttatat TTTTATGGTTCTGGGAGCTGTTPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.