Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs1950 ]


Position: chr10:93,348,489-93,351,723 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: HECTD2 - PPP1R3C

Timepoints:
e11.5

Expression Pattern
branchial arch (4 out of 4 embryos) 
heart (4 out of 4 embryos) 
somite (4 out of 4 embryos) 

Embryo 1

Embryo 2

Embryo 3

Embryo 4


Fasta sequence
CACAAAGTCGTCCTCCTTCAtgaatagaaaagcagaccattacatgttggttccagaggc
ccttcagaattgaggaagaatatcctggagaaagagctcatggcagagggctctgcgcaa
gagaattgacactaggtttcttaagctttctgggtctgagatcccttgtctgcaaaatga
agactttgaacctccatggtcttcaggttgcttcacttatccataaattaataactattg
tgttccagctatatgcatgccaggcactgggataccagtgaccacgacaagcaacgtcct
gctctcatggtgtctgctttgtagtcacaaagacaataagcaaagaaataacttcagaca
gtaagaagtagcatgaaaaaaaaatgatgatgagatagtgccttgggtggggcaggagga
gtcactttcaatgggatggttagacaggcccttaaggaagcaacaatgagcctgagaatt
ctaagggaagagggcagaggaaacagttataaaagttgttgagttttcattagggaaaca
atctgggtctatgacaaaggagccactgagctgaccaagatgagaaaatgctgtttttcc
ataagctgtcataacatagaccctccaggccctggcaagggcaggacctgactcctcctc
tacaaacattcgtaagtgccgactgcatgcaaggctcagcctccaagtctaatcacagcc
cagagccaagtgtctggaggcaatgagaggaatgcgctctgacctttcagagtggcaatg
acaatgataaatgaaggggcatttggatgctcgcccttgactataagaggaaacaggcag
actgtgaactggggctcatgttctgaagcttaagtttcacccattatgcagtttctaggg
tcacttgttgccacagagtagggcaagaatttgaacttaaggactgccctggtggactta
cagacccctcagctgtcagcatagatctctgagctgaaagcacatgggcaacctcaaagc
ttgcaatatcttctgctgggggagtgtgggggagaaggaaggagggggaagtgaggaggt
gagagggacaggggacagagtaaggagtggcctggtgggcatggggttgactgaggcaat
ataaaaggctgtgctgaaagtcaaaacacttgggtcacagtgccagcagtacgcagagga
gtcaggtaacctgtccagccattacaatagaaccagggcagcacctgctagggccaggca
tggagcgggctcctcgctcacagtatctcatttaaccctcaacacaacactggggaaagt
actattattatccctaatagagagagggggctgcaagagatttcacgccttgcccaaggt
cacataatggcagagatggaattctaacttgggtcaagccaatttcaagttgttaactca
ttggttatatgggaagggtaatcacatgtgctctacctgtctcatgcatttgttgggaga
tcaaatgagatgagaaggtgctttgtcaacattaatgagctgttccagggtctgctggtg
ccagcatggttcctagcagtgctgctatctgcataggttcctgcccccaaccaactacac
acctatttcccactctcccactatctcctgaaattctggcccatgcttctcccctggggt
ggtggcacattcccccatggccgcccttccccggagcagcagcagccctatccccagcca
agtcttggcactggacccgcaggatggggagggcatgtggaaaatctgaggagatgtttt
tcttccttgggaaggacgccaaactgcagtttgctggcgttctgtaaagtatgcacccag
agaagatttagtttaggaagaaatgggggaaagaatccctcactatttgcttagtgagct
gggttggccaagccagagccaaaccccacatatttgggctgactcgctatgtttacaaaa
caggcccatgttccaggagatgactggggaggcagcaaaacagtcaggaaggagggctct
gtaggcctctctctggcctcctttccatcccccgtctccagcccacatctgtggcttgct
ttcttgggcctggaaggctgggggtgggtcaagggaaaggtgggccaccatgacctcttt
tgcatggtggctttctcactccctaccccttcaactccatgaagcccactgtcagaactg
accagaggacaccacctccagggaggcttcctaagccctgaggctaggtctgggctcttt
cccaagggcttcctcaggctccttcagggcagagacccctccagttttgctcactgcagt
atccccaggatggtacttcaatgaataaataaatgactaacagctctggcctcctatatc
ccacgctggggcttttccctagttcagatccagaattccttggatctgaacagtgacatc
ctgggtgttgggttgtgtttgttttgtgttgcattgttctcccttgctttccagtcgtat
ctcctatgcttctcagcctttcattaaatgctgcatcaacaatgaactgcttgcaatttc
tcacctgtttctgcctcatgcctttgctcaacctgacccctctgcgcccacccctccctg
ccactcctagtcagccttgaagattcagtcccaacctcttttcatccggaagtctcccct
aaccctccccaccctaccctctctgtctccccctttggttagaggtctcttatctcagat
cccataaaaaccttgccacgcttatcactgtttacatagctgtccctgctcccagactcc
aggctacttgggagcagggaacgtgtcctaattgcatctatcccttgcccttagcacagc
gcctgacatgcagcagctgttcaacacatgcttgctgaattaattcattaactaacatat
gcagaagctaataatagcatgcaatgtcatggggccgagtgtgcatgagatcccagcaaa
tgctgtgagcaaagaggaagaagccattgccgtgggcccgagtgacttgggttggggaag
aaatggtgtggaaagagaaaccgacggggcatacagcgcagaaggcagaatggaggcagg
atggagaacggtcatcgggtagcagggtgaaatgagaaaaaggccaggcttttaaaaaca
taaatcaatcacagcctactcctgcttaaaacTCCAGTGGCTTCTCTCTGTGtTt
Primer
(+)CACAAAGTCGTCCTCCTTCA
(+)cacCACAGAGAGAAGCCACTGGA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.