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Human element [ hs1944 ]


Position: chr15:65,377,669-65,381,418 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: KBTBD13 - UBAP1L

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGACGCAGGAGTGGTGAAGccccaagctcactagcctggtgctatcccttaggggccctc
caccctttgtgaacagcctctttcctcaaccctcctctagtgacctgatttgagtgtgcc
atctctttcctgtcaagaccctgctggacatgtgccctgtcccctctgaccctcagctct
ctgggctgtgttaccaagtggcttggctggggcacagtgtactggaaaatgcccatctca
gtgcctctgcctgatcacacagttatgggaaccagaggaatgtcttacaggcagaggtgg
cgcctccgtgaccggaagccagggccttgcctcccaaggcacttgaatttgagggggaaa
agattgacctttagaagctctccgaggagtggctgggaatggaaacagaaccagatggca
tgagctccagagtgcacagcttctgtcaccccctcccaagtgaggggccaggcaggcctg
cagccccggcctccaccaccctggctggaccggaccattacaagatttatccaaggggtc
ctgcaaggtacatagagggagccctggggatccttgcttcaggcccagccctgccacctg
tttgctgggtgacatggggctggttgcatcacctttctgagccccagtttgtatctgtgg
ttgagatgtgtctggtgcatacatttgctgtggggtcaggtgggggaacgtgtgtgccgg
ctcactgtgaagggagccagtgtagtggcagggaggctccagctgcggctcagacttcct
ggattctaatccagttctaatactttctgactgtgtgatcttgagcagttgcttaacctc
tctgagcctcaggtgggcatctgtcaggacagcagaacctaaactgaaagggctgttggg
agagtaaatgagagagagcgcagacagggcgtagagcagagcctggctgtcagtgtcagt
gaaccagaaacctccctgccctcaggcatgggcagtggagtatcttggcgatagcagtca
gtctgacttcagatggagaaggcaattaatgactgcctggtgtagttgggagccccaaag
agttttggccttgaaaggatctctcatcattcctcctgattagggcattgtctgcagaat
atgactctagggacaaaggctggtgccccctctggtggagggaggacagtgctttgctgg
acaggcaagtgtgtgagtcctctcacctgtgcaggcagcctccccagccctgggtctgac
tgaagatccagatgctaagaacttggcatccctgtgacccatgggccccagctctgtaac
tgaggtccctgcactcctggggagctaaagacgcttctcttaggttcagtctcctacctt
gaacccccaaaacagctctggactgcctctaggcggtctcatgggccacctgcccccacc
aggcctggggttgatatgacaaatcaaagctcctcatcacaggcacggggtggtggcttc
cttgcccagcagcacccactgctctcctcagagttcaatctgctccactgccgagtgtgg
ccactgctgctggcctgctcaaggacagcaacgcacacttgtctctgcttgccttgctgc
catacaaaaggtgccatgtggtttccaaaggagcacagcacagggggtgtgaaccagctg
gaacctcactcccttccatgggcaccagggggcctgtgcagatcaacaccaggaccctcc
cagcaacgacagggatcccttcttcagccccagccctgcagtccttccaggctctgaagt
ctgggtgctgaggaacgggggtggctgccttgtttctcggaaatcacctcactagtagtc
atcccaagtactagaccttccttgaatcccttctggcgggtctttcagctggagttcagt
gacaaccctttggaaggcagctcgctttcagcatgggccactcctcaggtgactctcctg
ggcccccctctccccccactctttttcttattcttctttcagcaaacactctgtgcacat
cctctaaccagaagctgtgccaggcgcaggggcagagagacaagccaggttcagcccctg
cccccagggcctcacagtagagcgaaggaggcagccagctcctgcagcagttaggaccac
aaggtgagctccctgatggagatagcgtccctcctggtggcagcctcagcccagggttcc
ctcatccagcttaacataacttcctgtaagttcacagggagacagcacacactctctgcc
ccacttgactgccactgcctttacttatgttctcttgcactcagcagggtgctttggttg
tcagccagggaaacctttggctaagttcaggagaacaggatcttactggaaggactttgg
gtagctcagtgctccctgggaaggccagcacacctggctggaaatggacagtccacagca
tcgggagctgcacacagtcccactgaggctgccccagaacgtgtatactcaagattccag
cgctccagcccggtgttggactggccttgtgtgggcaccatgcgctcaccccctagacag
aggaccacagggcactctaacaacacaagaagatggcccacagctgggggagggtcacct
cccccaacttcagtgggtgtcacttaaggggaaatggcccgcacagggcctgctggagtt
cttagaatcgttcagctgctggagtatttgggatatgtggctaagtcacaccctggggct
gtcagtcctgggtccctggctcccaagcaccctggcattcatccttctgccctcatctgg
cacccagttaatgtctctgctcaacctggaaacattttcttaacgacaaaaaaataaaat
cataagttaaaaatctcgagcagtaaaacagcagatgacgttgtgtgggcagctgcccag
aggacacagaacgcacgtctcctgagcgggtggccttataaggacaggttcaggaggaga
atgggcaggagggagggccacccaccaggagagtaggaggctggggtagtggtgggtgcc
ccaccactgggctgagtgtggagccagcagggtgcctggccaggacctgactccacagag
ggacttggctgcgtgcaagagccagaggcccttgtgggccaaagcctgcccgtccctccg
ccttcactgtgtcactgccagcacaggcactgacctgctctcagccagctgccacgcaaa
cccacctggcagcctcaccctgggaaccccctccctccagggcaggggccatttcctatc
cttcatcccaccttcccccactcctgggcccagcaggcctagcaccagctggcatgacgt
gcagtaaaggtttgtggggtgacagaattaggaaatgaagggttctctggtagaagtttt
ggctcatcacctgggctatagcacctggaactcagggcagcgtcttctctcctcagacgg
cccaacgtggggctgaggaggtgggtagggctgggcagtcagtttttgccctgcccagga
tcacctttgtccccattgtgaagacacacataccatcaacgtcctcctgatagggtggaa
gagtttcactcccccgaggtcaaagtgtgtgtgtgtgacagaatatgtgtgtttctggga
gagtcctgattgtctctgcacttttctgaccccagcatcactaggattaaagacctggcc
cttgggATCTGAGGGTGAGCAGAGGAGcgc
Primer
(+)AGACGCAGGAGTGGTGAAG
(+)caccTCCTCTGCTCACCCTCAGAT


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