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Mouse element [ mm193 ]


Position: chr13:43,291,289-43,292,448 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gfod1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAGGGACAGGGCAGAATAAAggagatcagatcagatcataggcttttgcttcttcacctg
ggatgtcacggagtactacaaataagccactgcatttcttagaagctatggggctcattg
gacagcctagcccttgtggtggctgcaggggacagcagagagctgggcagggcacaggag
acacacagtgacaggggactctatggccctgacaatttccaggtccaggcaaggtttgaa
cgctgcactaagcgtcaagcgtgtccactcgaatgttgttcttatcactctgttctctgc
tggcgtaaacaaggggctgcagcagacttcagggaactcagtagtgcaatgcgtcagtcg
cctggaagagagccagaggcttcagtggccctcttaagggctccagcagataaggaccct
gatgcaggggagaaaaggccagttgggtctgctagcttctttgtactaatgcaatcactc
agactgataaactctgaggaaaccacatcactgcagagaagttctagaagccccagctaa
atgcagagcgtaacccacctgctggacgctgaccggagtgagctagcagaatacaagtgc
tggggatggctctggagccatacttcagacttctgacacctcccttgcccaaaggaaaca
aataggattgtctgacaggtacttagttccccagtgtcatcctgtcctgcaagatccggg
gttttggtgggcaaaagaaatcaccagtgaatggagccagagtcacaggctagtcagagt
gaaagttcacatccagcaataggacaatagcctatgagtagagtgggccttgcgttcttc
tcagggtgaatacctggctctctgtcccctagcctccagagatgcataattagagattgc
ccttttgttgttgtcacaaggttttctgaatactttcaagatttaattgaggttggaggt
atggctgagcggtagagagcttgcctgccatgcacagagctaggggttctatccctaaca
cataacacatctgtaaaatacgggtcttcctgtgacagctcagcgaatactgtccggtgc
agtgcaggtctgagctcatcagctaggcagcttaatggcctggatgagcctcccttcccT
GTGTGGTAGCCCTGAAGGTa
Primer
(+)CAGGGACAGGGCAGAATAAA
(+)CACCTTCAGGGCTACCACACA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.