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Human element [ hs1913 ]


Position: chr22:35,982,681-35,987,358 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: RASD2 - MB

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CACCGTGATTTCGCTTACTGCtgcatccctaaagcaaaacagagtttagccagcctccca
gagggtccccagagatcctggcttcttggtatgcacacctttgtggagtccgcttccacg
ctgagcagaggacctgtgctactgagaggacactgtgtaaatgccaaagtgagacctctg
aggctgggtcatgaaagatattgcacttcctccttggctctcttggaccacttgctctgg
gagaatacagctgccatgttgggaagacactcaagcagcattgtggagagatccacatgg
tgagggactgaggcctctggcccacagccagcatgacctggccagccttgtgagggagcc
accttggaagtggatcctctctcctgtccagccttagatgactgcagccctgaccaacat
cctgcccacaacttcatgagggatcctgagccagaaccacccagccaagccagtcccaaa
ttcctgatcctcacaccttgtgtgcaagaagaaatgctgattgttttaagccactacgtt
ttggagtaccttgttatggagcaaaattgaatccaacactttctaagtagttgttgtata
aagaggtggagagatggatgctgaatgagaataacaatgattctcactccctgagccctc
tctgtgtgctaggcatagtgctaagtactttacatgtgaaaccgtcacacagccttatga
gaaggctgctaccctctacccattttatagatggagaaataggaacagtgaggttaaatt
actcacccaacatcccaccagcagtcctggggctttgcaccctggcagattgggaccaga
ggcttcactgccacatggcactgtctgggtgtctcttgactcttcccagaccccctctca
ggctcactgggggcctggaagagctcactgtcacagtccgcgtggcatgcatgccctgca
gagctaggaatgcatggctcatggcctggtgccagtgcctcttgtcccactgctgggaac
actgccctgtcacctaccggtagaagccagttggacagagcagaaggaagaggatggctt
ctgtccagccacaccccatgggaccaagtggctgtaggggcaggagtgggggtcagagag
ctcagattccagccggctcgtcatgctggtctccttagcaaacctcctaaggttacacac
cccagggttctggctggactcagagccttcgtcctctggatctgaaatgatatggttggg
acagagctggaagtaacaacggaaaaccctgagcccttcttgtcctctgagcaacggagg
ctaaaaggatgttggggcccagggagcatgtagcactcaggcccacaccatcgtgagaag
atagttgggctggcacagagctggatgccttctgagagggtacaaggggcctgggcacag
gatgcctgggtccaggtctggtctctatccgtcacagtcactgtgtgacttcaggcaagt
tccttaacctctctgtgcctctaaacaattcatctgaacacatgcaggtggcaatagcac
ctattccctgagaatgaatgagcctggtatgagacaaacactcatgtgtgccgggatgtt
tggttttcatagcactaacctttccaacaaccttgcaaggcaggtaccattactgccatc
tgcccatgaagaaaccgaggtttggttaggttaagtcactctcacgggccacacacagcc
agtctgaggtgaagacagtcaggattcaaacccaaacgaggtccttacctctgtgccacc
ctgctcctgttcatttttgagcctcagtgccagccactatgtgtgatccctgttagacac
aatcactgctgtctagcaaacagacagagtgggttgcttggggaagcagggagctcccca
tccctccagaggtatgcaagcatagcctgggtgcggtggaggccttaagcattgggtctg
gtgttgaatccagtgccatttaaggcccctgctacccctagattctggggttcttcacta
tcctcccccaaagacagagagggcttagcaggggaaactgaagcccagagccaggatatg
cccaaggttacttcatcaagacgctgttgaacccaccctccatcacgccaggagaaaggc
gggccccttcctccaagggccaggagaaggaataggggtaaaaaaagaagccacaggacc
atgggcaaggtgagggtgaatcctgaagacaaaggtggccactcggtgggtgttcagagc
cagggagcaggtgaaggttgtcagaaacaaggtgagtgtcagacaccttggacttctttt
ggttcagtcccctcatttgacagatgaacaaatcaaggccatggggggccgatcctcctg
tcccagatccgtaatgccatgtagggcacaggctgctgcggaaataagaggaaaggatgt
gaaggaggtgggctggacttcacaaagcctgccactctggcacaaagtggatgggatacg
gggtctctggcccacactctgcccctgcccatgcctccctcctagcagatgatgagctat
tttccaagcatgtaggatgcactaaacccttcttgaggtgtcctcataaatttgagccta
acagccgcctgtgagataaggactgggaatttcatcatctacatttcttcagaagaggaa
actgctgccagagaggtgaaatcacttgcccgaggccacagagccagccaggaaggagtg
aagcttagcagtggcccctgagacctcagtcaccctggactggcgttccccttcctggga
gtaagggatgagcacactgggtgagaaaatctcagcctccgccctctggaaaatgactca
gttctggcccctggtcaggacatggggtaggtggccagacagccacaaggttgggctgta
agcctctagcgcccaggcagccccgctgccacccagagcaagtcacactcatacgctctc
ctcagttaaagtgcacaggctgagtgcggtgactcaagcctgtaaactcagcactgtggg
aggccaaggcaggaggatcgcttgaggccaggagttcaggaccagcccaggcaacatagt
gagacccaccccatctctactaaaaataaacaaatttagccaggcgtggtggcatgcacc
tctagtcccagctactcggaaggctgaggtaggaggattgcttgaacttgggagcctgag
attgcaacactgcactccagcctgggcaacagagtgagatcttgtctcaaaaacaaacaa
acaaaaacaaagtgcacagttcagtgagtcttagcatatccacaggtgtgcaaccagcac
cacatccactttagaacattttcaccaccccccgaaagaaacccagaagcacttagcccc
cgtcgccacaacccgcctcacctctagccctggacagccacatatctactttccgtatct
atcaatttgcctcttctgggtgtttcatataaatggaatcacacgatatatggccttttt
gcaggcaccgctttttgaagtcttacaataacattttgcaataaaaacagtgttctctca
attttattttattttatttatttatttttgagacagagtcttctctgttacccaggctgg
agtccaatggtgcgatctcggctcactgcaacctccgtctcccgggctcaagcaattctc
ctgcctcagcattctgagtagctgggattacaggtgcccgccaccacgcccagctaattt
gtgtatttttagtagagacaggatttcgccatgatggccaggctggtcttgaactcctga
ccccaggtgatccacctgcctcggcctcccaaagtgctgggattacaggcatgagccagc
atgcgtggcctgttctctcaactttatagatgaggaaactgaggctcagagtggttcaga
gcttgcccaaggtcacccggctcagaaatggtgggtgggatctggaatacgtctgtctga
ctccagagaacctcagccacccttcttagggccagaatccagagtggccagacagcttca
ggggcctaggttcagggatctaggactggaagaaaggctgggagggtcggggagtttgtg
agtcctgagggccagggctggagggtgaagggcctggggaggggcactggtccggcctct
agaccctcgagttacagggagaaaaggaaatatataaggcagccactggggaaggggtgg
ggtggctaaatgtaccttcgggaactcctgagggccaccccttctctggcactgattggc
gcagtcacaggttcctgataattaccccctctcctgccttacttcccccatggaaacggt
cccctctgcccacactcccagcccccagcagccgccagccttcctacgatgactcagcct
gagccactgtcccctctgccacctccaccctcccccgacacctgtccctttctagctgaa
gctgacccccaggacgtgattatcaccagcacccgggtggctgtgccaggactggcctgg
ccagcacctgttggggctgggagacagctctccccagcctgccccctgggtcagcctact
tgggggccctcacgcccttagggggctctacccaccccATTCCTGGCAAGTCCCCTTA
Primer
(+)cACCGTGATTTCGCTTACTGC
(+)TAAGGGGACTTGCCAGGAAT


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