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Mouse element [ mm1912 ]


Position: chr13:15,645,589-15,650,450 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gli3(intragenic)

Timepoints:
e11.5

Expression Pattern
facial mesenchyme (4 out of 4 embryos) 
forebrain (4 out of 4 embryos) 

Embryo 1

Embryo 2

Embryo 3

Embryo 4

Fasta sequence
AGGAAGTGGGGGTAAGTCTAGCattctgactttgagctttttctaaggaaggttgagtga
gagatggtgagtgagaggtggaccaggtaactaagaaaataacggtagcatttgaagaaa
tgctctaaattatgattatgattaactctagctatagattttggcaagataacttactag
aaagccacacagatgagaaaaagaaagaaaaggaagccatgttttttgaggaaatcagtt
agcctataagatggttaacccctcccacacctccaagttacatcccttcacatcagtcag
cactggctcccttggaccttgactctgatcctctctgccttctggttctgctcatgtgcg
tgattctcctagagcagctagacatgattctatcaggtactgtctgccaaaatgccttcc
tatcctggacacctaagagccatgggagtcttctagttaaacacattgttactgctttcc
ctttggttgtcattccactgaagccacatctcttttggaataatgtgatcaggtcaaagg
ctgtgcttggcttttatgttcaccagattttttggggaaggctggggagaaggccgctat
tctaccgtagcagggagtatagtcagggactgttaagtgcccgacagaggttactgtgtg
gaaactggaagagatgtatttccttctgttgttatcttagggttagtccttatgtgctgt
acagccccttctatatagagttataacgttgctgggattcccatgaaagatgatttgtag
acctttggaattagttgacaggttatacacagaaggtatatgaaagcctttttaatactg
tgcaactagcacaggagagccgcctgtcttagttgacgtgacactcatgcaagatgggac
tgtgggtgttttttctgaagccgagggaagcatagtgctgcttgcccttttcttcagtaa
ccacagtaattctcgattttggtaataatgtccctagtgatccttgtccggtgtgtgtga
agtcgatgttaatgagacctcccatcacagcttagctcaggagcaggaatacagttttct
aaaattgtcacgtgatttttttacatccttcttaatttgacaccagcccaaacagccctc
tcctagggtcctttccctccagtccttctgtttatctaccttctttctaaccttggattg
aagcatgaaaacaatgactcctgcccatttccagcttctaatggaagcaacattatccat
ggccctcctcctttttcttgtataattaaagaatgttacctttgatgtctcttgaaagcc
gtgtctcccatcctgctttggctttcttgatcttgtgtctataaatctgtgctgagtcct
cacacttctccatgaaagggctccattttctctcttctgccttttcatagtttagattaa
tacagagtaacaaaattcagtcttttattgcagtcctggtggcctgataacagtttaggt
ccttgtatcatactttctcagttatttgggctttgttttggtctccagtaaataagatct
tttccaccttcctagagccatccttttttgggggggactgaaatttcccactggcctcta
tttcagatgaatgtcctcatcctagaacaaagagaagaaaatttttttcttattgatgga
tttgactgtccagccttttgactgtgtctgtcatttgttaagtgagcatgtacttactga
atggcccaagtgctgcaaaacactgaacaaaaagagcagtcccctgattctgtggatcat
ggagaccagcagacaaagtcactgagaaggccttgagggaaagacagtttggtgtccttc
aggagtatgtgagacacatagctcctctggacattgttttatcaacatctctctgtcctt
gtctctcccaagatgaagccaccctctgcccacaaaggtttctttagcttcctctgggta
tcagtcctcagcccagaaaactttctgaaggaggtaaaagccatgcaattctaaggcaaa
gaccggaggaaagacaaatctagatcaagggacattctcactggctaggaggccacagaa
agcgtgctatccaagggggagctaaagaaatcttttgggcagagggtggattcaccatgg
gagagatgttgacaaaccgatgtcttgaggagctgtctgctcagcctcaaatccaggctg
atcccaaagactctcgatacatggcttttgtgaattaacaaacctctgggtaacttggat
attgcaaatcgggagtttctctgccttagagacttgcatttaccctgctttgaggattta
cctagtcccccaatcccacagcttaccttctgggacttgcctggctgactgctcactccc
acttctggcagcattttatattttcatatgaagacaacatagtggcactttcccttgttc
tccaactgttgctcttgtatgtactagatgaccccaataatcacagtgtattgaacccaa
attacaagtcccagacatgggaaatcatgtgctcgcttttctaaagaactaagtattctg
catgaagacagtttttaccttcagaatctcattttcacaatgagaaaactcaaaccattg
tgtttgtttgactgggaagctcccgagttagcataggacagtcaagccagaaaaactgta
gggaggacctttgttcagctggagatggtgccagcaatggctgggagatgaagctggggg
attcggtagccaaaatgtcagagaaaagaagaacaaagactcacattagtggaatgagcc
ttcaatccccctggcctaaaataatctgatgggagatgctggaaccctggaggaggagac
actggcctccctgtgggggtcttggttctaatcagcagacattgtactggtcagtgggag
cccactctagggagcgggtgtttaccttgtccactggggggacccaaatctacatgctga
ttgtactctgactggagggtggaattgaaggaggagcctgtttcctaggaaatataaaga
gaagcagagaagtgtacataggggtgcagagaaacaaacagcccctcttcttttgacttg
ccttcttgggctaattctactttcaaattgggcaggatttcaggctcctctcctcgtttc
tgtttctcccctttgttaagaatgctctcccccaccctccactccactcccatcctccag
ttctcagggcctagaagggaagtgcataatatggtggttttcttgtggcctgatttccta
ccagaaggactatgatcccttccaactctgactctctttttcccctccccactactaaaa
ttcctttagccacaaaggcttctttccaggcccccatgtgttagaacttcctttggtctc
taggcctttgcaaatgttcctttctctctagactactcttctaacctctttgccacaaga
ctgttatattgtcatttcctccaggagaccttctggactatgtggattgatcatttcaac
cctgtacaaagcctacttatctaatatgcagctcctccccctgccccccaaaaagacatc
taggggatgatttttatatatctttttttttagtttttattttttggtttttcgagacag
ggtttctcttgtagccctggctgtcctggaactcagtttttagaccaggctggcctcgaa
ctcagaaatccacctgcctctgcctcccaagtgctgggattaaaggcgtgcgctaccacg
cccagcggggatgcttttttatatagtcccctttgtcattgatattttgatagcattatg
tatctattacattactgtaaattgattacctagagacaaagcagtttgaaacacctttct
cagattcctttctaggacccagtacccctagttgactacattgacacgacctgtgcaagc
atatagcacttgaaaattttcctcatttcaaaaactaagttttttgagagtctgctgtga
gtgagacactgtccaggatggggacactgtgagagtatttgccatatcatgtccttgctc
ccaaagctgctgagaggagacacataccgaataccagagacctcaagaaggaacaacaga
tggtcccctgtggatggtgcagctggagatgtgtgatgggtgctgttgctgttgttgctg
ctgctgtgaatgtgtgtgtgggggtgggtgggtgggtgggtgggtgggtgtgggagtgtg
gatgtggggggcaccctgctcaggaaccagaagccacaaagttgaagtgatagtctaaga
agggacaagtgtgctaagaagggacaagtgtggtcctggccatgaagtgggatggtctgc
ggagacaagtgggaggttcggttcatctggcaaggggtgggtagaatgtagaaagagtgc
atacctagcaggctaatgtagctgcccacctaggaggctccctcctcagacactgtggcc
cagacatggagccccactccccgaaaaacattttataacatagcctctacccttgaactt
ctaaatttacgtatttcatgagatgttgtcaagacttctcttttgatagatgaggatatc
aaagcccatgggagctgaaaaagttgcctgttttataaggtgtgaacccagttttactta
aaatctgaggttcttcacttgtgattaataactggcaatttcaaagatggtccaaatcta
tgcaagggccagttctgatgggcactgtgtcagactgactaactagaggacacttagaaa
ctttgtctgtcttaaggccgtagtatggagtaatgacagtGCTTTATGTAGACTTGGGGT
GC
Primer
(+)aggaagtgggggtaagtctagc
(+)GCACCCCAAGTCTACATAAAGC


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