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Human element [ hs1908 ]


Position: chr7:150,665,549-150,670,065 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: KCNH2(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTCCCAAGTAAGAAAAGCGAACaccaaaatacaacatatagcacaatatcatttacataa
attaaatctatatgcatatatccagacaaaatacacatttgcaagaacatatgcaagcaa
cacattcacagtaagtacatttgaacggttgcctatggggagggtaatgagactggagag
tgagataaaagggaaaaggaaaaaaatgaaagagaaaggaaaaagcaataacacaaatgc
tgtggtttcaattatttgggggagaggcaggacccggggccagcagcagcctgcagggag
ggaaggggagaggcaggcagcatgcaggatggggcggggtgcaccataggagcaggggtg
ctgaggccccggatcaggctcatttcccacgattgcaacagcacgggctaggagctgcag
ccacttaggtgacgccctgcttcatggcgaggagaatgagctctggcaccgcacgctgct
ttgtgggtgtctgtcatctcattccaggaacaccctcacaccccaaagtgcatcagggac
aggcgctatgatcccacttagcaaacgaggaatggaggtttgcagaccccagctaaaatc
caagtttcctgaggccctgagcccatcatgccccagaagggctctctgggggcaagagag
ctggtgcagtggcattccacgctgggcagggaggggacagctaggctcgggttcccactc
aggccacccgccagctgggtaaacttgggcaagtgcctcagcctttctaagcaagagctt
ccctcccataaagtgacggagaggaatcctgcctttcacagggccatgaggaccacctgc
ggtaaagcatggttccccagtttgcaaactacaaagtgcagtcacaacaatagaagtgcc
ttgtgctgctggtcaggtggcatcacccccacctcagctgtgctctctgtggcagctcta
agactctgtccccccaccccatcctcctcggtccacctctgagggtgaagctgggagccc
ccagatgctcctgtgccccacaatgtccacgcaaagcaaggctagaggactcccagacac
agcaagtctgtaaccaagctggaaactcctgccaagtcacctgactcccagggaaggctc
ctgcaacgcagcacactgcccaccccattcattcattcattcagcaaacagtgccgagct
ctcgctgtgcactgagcacgcagatacaacagagaacaaagcagatgggctgctctccac
ccacctggagctcaaggcctggtggcggggagagggacagggaacctcctccagtactgc
aggaggcggaggaccaaggctgcctggctcccaaggtgtttctcatcctggataagcacc
caaaaaggagaggggtttatctgaggccaaccacaggccacagcatagagatctttatgg
gcaagactaaggacatggaggggactttaggggagcaccccacattcatcacctgtccca
gcacccctccctcttctactgaccctgactcccatggccctcctgcccacgtcgggaggg
aagttctgttaaactccctcacactaaagggctaaatactttctgtctctatactgggag
ggggcaatgagagagaacgtgtttttaaggaaaaaggagcactctaaacgcagaagttct
ctaagggaggagtttcaggaacgcttcagggaaataccaacatgtgaagggctttcttgg
aacctccaaaatcaccccacccaggaagccacctctggggagaaaagaggcccagtctcc
cccctcacacacccccaagctggcccttctgctgccccatggcccccctccccagagccc
aaggccaccatcaaactctgctcccatctcagacagctcttcgcaaatatttacatagct
cctctccgggggctgcagaagacgcaacacggagaagccgctctcccgacgctctccaga
ccccagggtgggtcaaggagtagatagcacccttcagttgcgtcatgcctgcctcacccc
tggagcaggactgggataggaagactgcagccccggcagaccaggacagacagccgcagc
tcaggaatgacccccgtggagcccctccaacaggcctctgatccagctagagaagggaaa
ggtggagggaaggtgctgcagggcaagaggcaactggctcggaagcagggcccccatgga
cccccgcccgcacctggcagccctgcagattctcccactcagccctgtctccaggctgca
ccaggccttgaccagaaggataggaacaccgctgtccccatgatgaagggcgctcccctg
atagcttcagtgccacaggaaaagttctcctgtgtctaagccccatcctctgggatcgct
ctggtctgcctcctatctcaagacaagaaaacccacttatacaccaatccctgtcccacc
tgccttcccagcctcaaggctccccttcaaggaaaagcttctttcatcctcagctcagac
ccagggggctgaaaagaagcagaaagtgggtgtctgagctggggaggggtcagccatgag
ggagaaggtgaggcgtggtggtgacaagagcagggcgtctgatttaaaggaatgggcaca
ggaagaaatgaagaaggcaaggaagaagacaggacagacggccttgggggacggagaagg
gcaggaggcccagaggagtggggctgatcacaggaggtactaaggatttcaaggcagtct
gaggtctgaggcctgcaggagcactggggaggctgggttccaaggccggggacagaccga
agcccactgggcgtggggccacctctgaggccctgggcacagtgcactggggagcaggcc
tggacagcaggtccccaccccctcccaacagccgcagcatcagctgttgcagtggggggc
cctctgaccctgttaccatggcaactggcctgcagctggagtggagaagctaatagactc
ctctccagagacaccaccgtccccacccacgcacaagctcccggggacacagggacatgg
agccaggccaggccagtcagaggtatgagcagccagacagagccttccagatagaggctc
cgaggggtgggggacaatgggagagagggagagaggcaaggagcaaggttccggggtgct
gaggcgagggaagaagacaggaggaggcaccagagaggagataaagaccaagggacagag
agtaagccaggcaggcagaagacaaaggcaaggagatgtggggagtgagagaggagccga
gaaggtgggcacagtcaggctggctgagcacggtggcagggaagcagggagcagaggcag
gaacaaagagcagagaggatgcagggggacagagagaagggactctgtgaggactggcag
aggaggagccacagcccccatggcgatgtgggagcacaggtgtggacccagccagcacct
gctgcccggggtgcctccccagggccttgcggggatgttaccgccagccagcctcacacc
actggactctgcccccaattccacctgaatcccgggcctgacttcaaggggcacagggcc
agtgagccccaggcacctcatgtctctcccttcagcccacactcccccagtctagcctcc
ccacctcccagcagtcccagcaactaaataatggggctgtctggctccaggccctgacac
tgcgcagagcaaggctagaggcaccaacacagcacagctgtccacggcggcgcctgccag
cagaaggctccacctcctgcccagctccccctacccgaggctggcccaggcagagaccct
gagaaaggcctggacagaaacaaggggtggcgcaggcattcctcacctccgcctccctac
caggcccatgtgtgagtacacacacaggcacgcacacacgcagcccaagccaggtcccgg
ggatcacaggagggactgagtgtttcaaggcagaagaagcggaggctgaggaaatctgtc
tgcatcaccccaggcctagaatgccaggatacatggggtcctaggtggctgagtgccagg
ccagcctgttggccaacaggagacacctgagccccgtggaaactaggtgagagtgaagaa
ggggacagacagagattgctggcacagagttttctgggtcacagccccattttttggagt
tgtaacctggagaggggacaagtttgaacttgggctggggatctgggttctaatcccact
ccttccactgattcactggtcatcagacctctgcttctccgtccttccacctgcaagtcg
aatgggttggattaggtgatcccacaataactcctctgcagaagggggcccatagccatc
ctctccagaaggggccagcctagactgggagggagggccagctccacctaagagcactcc
acacataccacagccaaaggaaagagccctcagccgctgctgccaagaggccaAATCCCC
AGCACAGCTACATcGTa
Primer
(+)TTCCCAAGTAAGAAAAGCGAAC
(+)caccATGTAGCTGTGCTGGGGATT


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