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Mouse element [ mm1893 ]


Position: chr13:15,483,014-15,487,719 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: AW209491 - Gli3

Timepoints:
e11.5

Expression Pattern
forebrain (4 out of 4 embryos) 
hindbrain (rhombencephalon) (4 out of 4 embryos) 

Embryo 1

Embryo 2

Embryo 3

Fasta sequence
AACCAAGGGAGTGAAGAACAAAtttattcacagtacaagggtaatctggcatttaggaag
tagagaccagaggggctgctgtacatcctaccattcataagaaatccccacagcagagct
agtcagttcaaatatcaatggtgcagagtttaagaaatctgcccttcaaagtagaaacat
tttccccacaaacagctacactgtgcaacggtgctgtcttttgtaagtctaatcttccca
tcattcacctcatttattctccttgactttcatgtcaacacctacctcagtaacaaccct
tttcctcaagctcttctcatcctggtgttctttagtttccataacactgcctgtgttcct
caccctcaccctcatacttggatatgtatctttactacaaagtaaacgtggtagccaggg
tttgtgtgtccagaactcaggctcccattctcctggaatcagtgtcctgctccaatctgc
actccaacatggaaagctgccttcaactttttagttgatagcaaaaaaagtttccttgaa
agtctcattatatgtgtgccttttcatatttaatgtatttgtgatgatcaatttcaactg
tcaatttgttggatcaataaatagctatggctttagtgaggcatacattttttttatgtg
tgtattagggcttttgaggaagattaactgagagggtaggtcattttttggatgtgaagg
gcaccattacatacagtagtcctagaacaaataaaaggaaagaaagagaatgaactagct
tagtacagagtcagcctctgtcagttgatccaatgcagtgtgagcaagcagccttggtca
tgcaccaccacagagactccctctgcatgttcctgccatgatggactgtatcccattaaa
ccattaaccaaaataaaatcccccctagagttgattgtgctgggtatttagtcatagcaa
tgagacaagtaaccaataaagtgtttaatggcaagttgttgttcattgttttgagacagg
gtctcactaagtagctgagcctggcattcaaatctcattacccttcctgagccttgagag
cgctgggcttatggacatatggtaccacatctggtttaactgttcttgtttatactcagg
tgaaaatgacccttactttcaatgctcttctttctttttgacattgctacaacattttgc
agtggccacatttatgggtaggatatctaatgagtaagtttcctgccccagggtcctctt
ggtacccatgacttaatcccttcttcctgtcagtccaagaccatacttctgaagagtttg
acagtcagagccccttccctgggatgtgatattaaactatgcatagggtttagcattccc
actggtcactgtaacaaccataacatataaacttgggaactgttggttttatatatttct
gacatatgggaggaggaaaagctagaaaaactagcttttaaaaataggattatagaagaa
ataaaaaattcttttattagtggatattaatccacaccagaatgaggctagaccgtttgt
gatagtttgtatatgctcagttcctcctccaccatatttgcctggatgctgccttgatga
tagccccaattaaatgttgtccttataagagtagcctttgtcatggttcatagcagtaga
accctaactaagaagttgtatcagggactagggtattgctgtgattggcctgaccagaat
gtgaattttaggactctggatttggaaagcagtggaatgctttaaatgggggtttaatgg
gctatcagagtaagcatatggaagactttgttgctgagagttctacatcttcatctgaag
gctactagcagaatactgacttccaggcagctaggatgagggtctttaagccgacaccca
cagtgacacacctactccaacagagacacaccttctaatagtgctattccctgggccaag
cacatacaaaccaccacacctttctctactccatgcacaatatttaactcaaatgaatca
gagcactgaatctaaatgcagaggtggttttttaaaaattcttagacaaaaatattgcca
taaatttctgagaccttggagtaaaaagcattttcttgaacattacaacaaaagcacaaa
caacaaaagaataatagatgaaatggtttgtattatgtttaaagacgtatacctaaagga
catccaaaagttaaaacacaacccagagactgaaataaaatatttgcaaatcatgtatct
tacaaggaagctgcatccaaaatatatctattactcataacttgacaataaaaaaaacct
gtctgaaaattttctaaaggctctggctaaaaaccttggctggctataacatgctatgaa
aaccaatcatttaccaaaattaagaagcagagtaatgaggcctgtgatgattagtccaag
ttatcaccttgataggttctagaatcatccaaaagacaagcttttgagcatgcctgtgag
gaaatggttagcttctgagaatgcttgtgatatctaggttaggatagtcaaggtaggaag
actcacaaacactctgtggattggacccctgaaactgaattcaaaggagaaaaaagatga
atagaagcatttatcactctctactttctgactgtggatgccatggccttggctgtccga
tttcctgcagccgcgactgcctcaccatggtggacgatgagctagaatgaaccctgtctt
ccttatgtgacttttgtcagatgttatattacagcagcccagtaaagtcattaagacaag
agcgaaagagtcatatttaatcaacaagtttaaaaaacatgctcaagggcttcctcatca
gaaaaatgtgtctgcaggtacattttccttcatttgaattatttctgtggtttgattgct
agtcacatgctcgcccatcccatagatggtccacaaagccatgatgagtaatgaagaatg
catctactgaatgggttttgcatcagatcaatatgaagggccttgaataaagtttcaaag
acaaaacaatctgaacagatacaaagattataaaataataataataatatactaatctct
tatgtctagaatatgatagaaggactggtaagtatctatgctctgccgttagccaaaact
taagagatgagtagaagttagcctagagtaacaagatataaggaggaatcctggccagag
gagacaatattgtgccataaagtttactcacaatattgggaataaagtttaacagagttt
gtgcacagtagtgagacttcaaaggacttcagactttccaggggacagagctgcacatag
aggtttgcagtgatatagaatgatagtattatcattaagataaaattgatattgcatgtg
aattaagaaaatatggtcaaagaaattagaagggagttaaacaatgatttcaatatcttt
ccccaggagatgataaaaatcagaacaaagctggaaccttttatctaaagaccatgaggc
tgatgcaagactctctgagatggttcactgcagcaggggtgtattgaataaccatggagc
tctgacaatgaaacaagcataaaaagaaggtattttcccaattaagactatgactttcca
gtaataactataggaccattttaattgagataaatcttagacaacaaaacacatcttttc
ccccagtagatctattaattttcaccagtgtagaaagaacacatggcacaattctttcac
cccccacccccaaatctttctcagagccttcttgcaattaccacctcttcctactccaac
cttttgcatttactctctgtccctttgaatgttgtagaaatggaactatagtgtttatat
ggccactttcataaacaacatgtatttaacatacagtcagaattattgcctgctttggca
agtcctttgttgtgtgttaggttttggaaaggggtggcaaaagttcaagagggcactgag
atagattattggggaacaaggagtttattagaagagttattaagccatggccagccagcc
agccagagaggcaacagtaaggcagggcttagaggagaaagaaacctgagcacttggggc
agaggagggaggctctttgcagagctgctgaggatgggggaggtttcacagcaagagcct
ggagccaggcgcttggattccctggcaggaggcagagaagggggtggggagcaggatgtg
tcacatgccaataatccctttgatgttaactcacttcccaggtaagaaataatggctagg
ggattgtctattcactagggactcacagacaatgtatcagcagggtgcctgtcggaatct
tgtgcaggcgagagaaggctgcagcaggtatggtggcctgcacaggggctagacactcgc
attcttatattcctagtatcacatccatacaatcaagcccttttgtttatgtactttttt
taaaaaagagtaaaaaatgattttacaggagagggaggtaaacccaaattgacagttggc
ttgtggctcatccaacttctgagctgaacaaggacgcaaatggtggcggtgggggcgggg
ggggggggctcttcttctgtagtcccctagtgctgaggctgccatttgcatcctcccatc
cagaGGTTGCTATTCAATTCACGTGA
Primer
(+)AACCAAGGGAGTGAAGAACAAA
(+)tcacgtgaattgaatagcaacc


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