Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1880 ]


Position: chr13:15,394,337-15,398,975 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: AW209491 - Gli3

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GATACCATCTCCTTTGGCTGACattcttggaaaatagaaaatatcttattcaaaggtcta
aataagtaaatcgttgtttggaataatctctggcatatgaaaaataataatacatgatgt
caatttttatttataaggatattttattaaactattagctgctacctatactttcattca
ttctttcaacaaacatacacttgtgtttgcaatggaggaatgcctttagcataagggatt
acagtgacacagaaagaaatgtcaatggaacaacacaaccccagatactctctccaccag
tagatgcttcagagaactggaaaaccagaaagataaaaatatttactacttccttcaacc
tccatgggtctccccttcatgattaagaggctgtaagtctagtatgtaatacttgatctt
agaggctggatagatggctcagctgataagaatacttactgctcttggggaggacccaaa
acagttacaagcactcatatgccagttctcaaggatttacaactccagtttcaggaaata
tgaggtccccttcaggcctccatgttattaacatgtattcaggcaaaatgatcacacaca
taaaaaataaaaataaatcaaaaaacaaaaatcttagtcatggctctggtaaatactgtg
tagacaaagacaaaggtctgtttataccaaactgaataacattaaggatatattgaaaca
cagagagtgagtacatacacacaccacatttcccagcaaatcacaagcatcatgccatta
tatatgtagttatctatttactcagttgctctacaacccaatcaatggtatgatgactcc
tacatgctttgtggcatgcagtgaagatattctggtcaacaacatatggctatccccaga
agctaacagtctagtatgggtgttctaaaatataatgtgtaaattacctggggtacctgg
taatgttttctgggtccagtacttagagtctttgactcaatgtttcaggtttatggtttg
gcagcctggggcttcctaccacctcaggtgttgtaggatgtgctttgggcatggtggcac
ataccattaatcccagcactctggggagtagaggcaggtggatctctgtgagttcaagat
gtgtccatctattgtccagacaggctgagatggttattaaagatgctttgtgaaaaacag
agatgtatcatctgctctcctgaagacacgatatcctgagtcatcccagaaaatctgctg
cactcaaagcagttggtaagaattcctcacctcaaccacctcaccacacacacacacaca
cacacacacacacacacacacacactgaagtcccagagctgctgcttgggagcccagtga
actcatgaccccgaggccatgcagactctatgacagcacaaataccagcccagactatta
tatccagcaaaaccctcaatcaacatagatggagaaaacgaaatattccaggacaaaacc
aaattcagtctatccaccaatccagccctaccaaggatcctaaaaggaaaagtccaacac
aagtaaggtacctatagtaaagaaaatacaagatattaagcatctcacaacaaaccgaaa
aggagagaaccacaaacacataaagtcacctacaaaaacaaacaaatcagaaagaaacag
tcaactctctttaatatctctcaatattaatggattcaactcacatataaaaacacataa
gctaacagactggatacgcaaacatgatacagtatattgctgcatacaaagaaacacacc
tcaataacaaagacagcactatctcaaagtaaaaagatggagaaaggtcttgcaagcaaa
taggtagcaggaaacaagcgggagttgccaacctaatagccaatagaatagactttcaac
caaaagttatcaagcatgctgaggaatgacacttcatattcatcaaagggaaaattcacc
aagagaaagtctcaattctgaagatctataaactaaatgcaagggcacccacattcataa
aagaaactttactaaagctcaaagcatacattaaaccccacagaataatagtgagagact
tctttttttttgttcttttttttttaaggacatacaagttttctttatttttttaaagga
aatccaatacttgtaagcaaagaaatattgaacatttactaagtgaaatagtatattatt
ttttttaaatcttatgaaattattatatgtagtcttttaagcagtttttaaaatctattt
ggaacattaaacacgatagaagtagaaaaaaaatctcttatgaagtcttttatgaaagga
aatggtgacaggttcctgattagacagaaatcattttagctccaagaaagaatacacagt
gcaggataactgtggcttcatagaatgaattgggcagtgttcctactctgtctcttttgt
gaaatagtttaaagagtattgatagtagatcttctatgaaggtctgatagaattttgcac
taaatccatctggtcatgggctttttttgttgttgttgttgtttggctgttttattttca
tgactgtttctatttctttagagggtatgggactgtttagatgacttagctgatcctgtt
ttaacttaggtatttggtatctgtctagaaaattgtcaatttaatccagattttccagtt
ttcttgaatataggcttttgtagtaggatctgatatttgttgttgttgtttttttttttt
tttaatttcctcagtttctgttgttatatcttccttttcatttctgattttgttaatttg
gatgcggtctctgtgctctctggtaagtttggctaagggttcatctatgttgttgatttt
ctcaaagaatcatatcttggttttgctgattctttgtattgttctctttgtttctacttg
gttgatttcagccctgagtttgattatttcctgccatatactcctcttgggtgtgtttga
ttcaccacacacggggtggaatcaacacagaattcaaacagacctacaaagaagaattaa
tgccgatactcaaattattccacaaaataaaagttgaagaaacattgaccaatttgttta
tgagcccacagttacccaaatatctaaagtatataaaaacccaagaaagaaagagattat
agaccaatatctcttatgaacgtgaatacagaatttctcaatagaatcattgaaaactga
atacaacatcatcgaacatcataaaaaatataatatgtaaaaagatcatccaccatcatc
aagtaggcttcattgcaaagacgcagggatggttcaatatacagaaatcaataaaggtaa
tctaccatataaatgagattttttgaagaaaaaataaaacactatcatctcattagatac
agtaaagacctttaacaaaatccaacaacactttatgataaaagtccttgagagattagg
gatccaaggggaataccacaccataataaaggcagtttacaccaagcccatagccaaaat
gaatctaaatggacagaaactcaaagcaattccactaaaatcaggaacaagattagattg
cccaatctctccctacctacttaatatagtacttaaagtcttagcttgagcaataaggca
aatggaggagatcaagagaatacaagtaggaaaaatagaattcaaaatatccttatttgc
agatgatatgaccttatgcataaaggacctgaaaacttccttccagaagctcctacagct
gataacgtgtttagtaaagaagccagatacaaaattaatacagaaaaccagtagacttcc
tgtataaaaatgacaacaaaaactttttttagtataaccctaatcaaacaaatgataggc
tgtgatagcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacagcaacaacaaaaactt
taagaagacattgaagaagacaccagaggatggaatgccctttcatagatcagtaggatt
aaaattgtaaatgttcatcctaccaaaagcaatttacatattcaaagcaatccccattaa
aattcaagcacaattctttatagaaattgaaaaaacaatcttcagctgcctatgaaaaca
aacaaacaaacaaacaaaaataagaactatttgagatatcagtatcccaaatttcaaatt
gtacccagagctgtagtaatgaagagaacatggcgttaagaaggggggacatgttggtca
aatgaattgaatttccaaatataactctgtatctatgaacacccaattattttacaaaga
agccacagtacactggaaaaaaaacagcagcttcaataagtagtactggtcaaataaagt
agccatatgtataaaaatgagcacagatctataatcctgcatacgactcaatccaagcat
atcaagaatatcaacataagattggatacttggaatctgatagaagaaaagatagaaaat
aagcttgaattaattggaaagaattttatgaacagaactccaaaagcacaagcaataaga
ccaataattgataaccaggagctaatgaagctgaaaagctattgtaaagaaaagaacACC
ACCATATTACCAAAGTGGC
Primer
(+)gataccatctcctttggctgac
(+)GCCACTTTGGTAATATGGTGGT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.