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Human element [ hs1878 ]


Position: chr7:19,157,694-19,159,713 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: TWIST1 - FERD3L

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
gggtGATGTCTCATCTCGCCCAAGagccctctaggtccgtggggccgatttgggattgct
ggggctgggggggtggtgtggcgcggggtgggggggcatgccaagaaaagtgtcaaccgc
ggagcccacccaatggtcaggtagacgaaccccttggagttccaaaggccaaaccgcggc
ggcccagcccggaggtcctgggcgtttctgaagacgtggccgcgccgcgggggctgagga
tttgcgtcccggcctgctctctcgcccttctgggccctcctttcccctctacaacgaccc
agtctgacgctccccaacatccaaaggactacgcctcggaaggtgctcgaaagaggcaga
agttcactcttcggtggaaggaaacccagtccatgggaaaggcagcagagccagaggggg
gcagcgcagcgcctttgctgcggccctaacagctggcaatgccaacccaagggagagacc
ctgtggccatttcatccccacccccaaattaggctccgcattgtgaccttgaaaggccag
cttgtaagagagtgaagtgggaatttgatagcgcctagacataggggctgcccgctctga
gaccccccccgccccagcccccactatctagggcatccagtggacaattaggcttcgtga
gccccaattccaaatgcttggatacgctaacattttaagcatttctgtctgtaagttaaa
acgaagagccccaaagagggtgttaatgtagatcctggcaaactggaagcagcaaagttg
gtgaaccagaaaggaagtcgccttggataagaagcccatcttttgcaatgccatacttgt
ttcctttttgaaatgaattgaggtaaaataaccgtttcaggtccatcccttacatggcaa
agtaaaaagctggagtcagtacacagtgttggggtgggggcagcgtttgggggcgacgag
ttttgtgcaccgcgctggagtaccctgcacataaggtccgctcatgggcttctcagtacg
gactcgccggcgggaacaattaattgagcaaagcgcccctttctgggctggagcaaggtt
cgcggctgcagatatctcaagctgaaggcaagagcccaggcgaggcgcaggcaggccacg
tggctgttccctgctgagactcgcagctttggtcttggaaacctcagggtgtggagctgc
ttgggccgactgaagggttcagctttttgggagaagtgagggcgagtgttatttctccag
cgaggtgtaaacaagactgtgctttcatgggagggacaaattgcagagttgatcccttac
catttttacagaaatactcagaaagtgactacagcttgtcaactggcctgtttagtgagc
cgctgccttactgtaaaattgtctgaaaatcagattcgacttgacctccacttaatttca
gtagcactctagcagttctcaaaacagtcacccctgcacccttgcgtttgcatcttccgc
tacaggattttatctcttggaagcgcttagagaatgcggcagaaattctgccccactctc
caccaagtgttctttttgtaaatctgaatttacagtattctgcaattcttatttagaacg
tggctgcagaaatctcgaaaccttttccacttcagctatttttttaaagataaatcttat
ttttgttttgttctttttttctcttttctcaaaaataaataaagagatcgaatgattgga
ctctttcctttgtggccacggataagtaagacaggaaagtgtgggtaaagtgtaaaggaa
atcttacctgaccaaggggaatttgggaaggggaggggagcggacaagctagaggagaaa
ccaagtccacagcagcgcagcagccaggggtcattagccagtccatcttgcaaagtcatc
agtctcaaagactggttcttaaacaagtgagcccagcccttttcccggcactaaacttct
agctgatgaagagctcctggcCATTGGGTACAGGGATCCC
Primer
(+)CACCGATGTCTCATCTCGCCCAAG
(+)GGGATCCCTGTACCCAATG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.