Mouse element [ mm1863 ]Position: chr13:15,202,610-15,208,247 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: AW209491 - Gli3 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence TACCAAGGGAAAAGGCAAGTAAcagtcttacccagctataaagcttacagactacaatgt gcagcatgacaagatattccccagggtggagtagtggcgcttacatttgtggggtaatca ataactatctaattggacttgaagccttctcaataggagggaactcatgcctgacactat aaacctagtgactataaggcaggtgagagcctactacttttactttcctaagcaggtata atttccaattgtattctaaatacttattcttatatccacagataagtttatcacctctaa ggacctcctttttgcagtggacagggaccatcacagaaagctacaactggttaaaatgaa gagtgtaactgacagtggcatgttggaatgcctaaccccaatgaacacatcttatataca agccctatacctaaggctcagggaacattgtagaagagagtgaaaaaaagtgttttaaga gccagagtatgaggacttgtgctatgatagtgccttctagtgttatgtcaacttgacaca agctggagttataaggaagagagaacctcaattgagaaatgcctcaactaaggttatagg caggcctataggatactttcttagttattattgtgggagggctcagcccacagtgagtgg gaccaatcctgggctggtggtcctgggttctatcagaaagcaggctggacaagtcagaga acaagcagcacccttccaaaacctctacagctcctgccttcaagctcttgccctgtctga gttcctgtcccgacttccttcaatgataaagagtgatatgaaaatgcaagataaataaac gcttttctcaccaacttgttttttggtcatggtgtttcattgtggcattagaaatcctaa ctaagatagatactgagcagtattcatgaaatcttagtaggtgataacacccattggcat tccaatgtaaatggcagaattttcacaaggcttcacccctagatgaagttactgacaaat aatcatgctaaaaagagagagagaataaattttcttcagtgatgagtgcccccataagtt gtctaattacaaatggtcattcctaaacatatgggaaaaactaatgaacccatcaggtga cttttacatttacatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacgtaattaatga agatgggtcatgaatatgagagggaatgagagaaatatgggaggaattagattgggaaga gatttaattgaaaatgaagtaaatagagtactcatatatgaacttaccaaaatgatgtaa aaaggactcttatcaatattttttaaaggatagggaaagataagaaaatgatatctagag ttatgatctttgtctcacatctttatcagttaaaatgtattctaatcttacttcccattt cagaagctggaagcacagagaacaaagagatctattgttactctactgactctgccagag agttcaaactccactttgtctgcctggagccatatgtagaaaacttccaatttcctgatt tttttttttttgagaagctggtgttttatccatgttgttgattttctcatccatttttct ttctgctgttgactttcctctgcaatcctttacttaatatatcaacttccatatatcctc tttcagaatccagatcagtttatagtcaaagtctgaacatttcatgtagcatttttacct actttggtacctttgagtttagcagttaaagaattatatttgcagaagtcacactgcctt ggctttttcattttctgttgcttctgcatagcaatttgtataccttctgggtttgatatc tcttacacttttacttatagactgtattggttaattttctgtctctgtgataaaatacca tgaccagaatcagctcctggaagagtttattttcagattacagttccataggtgtgagtc catcacagcaggaaagcacaacagcaagcagagaacatggaagctggaggagtgagcaga gagttcacattatcagccacaagcatgaaacaagcagagagagcaaagtggaggtgacac acactttccatctcaaagcctgctcccaacaatgtacttcctccataaaagctgcatcac ataaacctctctgaaaggtgtcaccaaacagggaccaaagagagaggactcttcttgaaa ctactacagggatcttcttattgaacagtctactccacaaggctcaaacaccagtagtaa ttagaaaaaaaagaatacaaattcttataatagaaccaaagtgtgtaaaggacagaaaga ctctgacaattggctaaggtacagtcatgcatcaccaggaactacaaaaacgacaataaa actactccaaaatgtgctatgaatctaataggtatttgaggcaagggtgaaaatggttag tggatgagatataggaagaatgcattgaaggaggtaaaataaagaagaatctaggttaaa gaaataaaggtgccaggcatggtggcgcacgcctttaatcccagcactcgggaggcagag gcaggcagatttctgagttcgaggccagcctggtctacaaagttccaggacagccagtgc tatacagagaaaccctgtctcgaaaaaccaaaaaaaaaaagagagagagagagagagaga gagagagagagagagagagagagaaagaaaggtggcagagcaggaggaggaggaggaaga ggaggaggaaaatgttcaatgaaaggggaaagagaaagtcagaaaaagtaaaaaggaaat tgaaataaatgtaagactacctaatactataaaaacatccaaagagaaatttgggtaact atgtgggggataaataaaaaagtaatttttaaatctggatagagtaaggtgaaagtacta ctcagggtagaacgggagcgaaggaaacacaagaggcaaaagggaaattttaagattatg caaaaagaaaatcaaaattcagtgaacgaaaacagacaaaaacgcacatctatctttatt cttgcaagagacagtgtcgttaaatgaactcattaagtctggcgaggattcagacagtag tggctgtaagtcagtgcccagaagaaccagtgggtgcatggagactgcccaggactagat tcacactcggcagtgcagctcaggatcggaacaaatttaagcagcatgtgggaattggct aaagtccatggcagctaccaggcaaccacttaggattcttttccccacatgcaatcactg tggagtaccaacgttgcagctgaggccaagagctcatgctcattccccacccccaccccc acccccaacaccaacccagactgaagggagcatgaagggcgaactgataattacatcctt aaatcatgcagatgcacagaaactcactactatgctattcattctaaattctatagggca acaccatagatttgcttctatgggtctgaattcgaatctcacacagcacttaccccacca tggcagtttgttacatgaaacatcacagggaggaaaggaactcaaagcccaaccatcagg taagacgtacagactgatgtgggttgttttaacccgaatggactcatattatagtttgcc atgtttatatttgttttgttaatctgtaatttattttatatttcgatgttcttaggatga ttgcatcgacttgtatattgctcagctgggtatcaattaatctgtaccacatagaatcta tatggtgttcctttatttctaccctctgtactaattctctcttccttttctcctgtaaag tatacttcttaactataatcttccataggtttaacagctttgggaatcagtagaccctta cagtatccaaaatttttcctcccaactacctttccaaacgctattttaaaaaacaaaaca aaaaacaacaacaaaaaacttggtctaatactaaactgtagccttacctccctacttttt aatcgtagtcaaagaaatcccagtatataccacactatcattgttgtttatccttcaagg ctttaggaagtgaaaaggaacacggttgttgactggcaagtgagacattaatacagtgac catatccagcagttttagttgctcccacagttaatactctactctggtagtagtctaaga ggtcacatcagaaactatgactttctagactaagaatctaaactataaactatacacctc aaatctatgacaatttagcctgacttgaacattggtaatccctcaacttaaaaaaaaaaa aaagcctaaaagaatttttttttaatccaagaaattgattgtgcattgtgggacataaaa ctgccagaaggcttggtaaggtagagcagtatgtgacccggagactcagtgagcatacac ctgaggcttaggtaactctcagctccctgccagactcttgactcggaacatgtgccatgg tcctcacataaagaaacatgtcctatggttcacataggtacaaaacagagctctccttgc taatgaggtacctagaggcctggagggcttagccaataagcttcccttcccaggcattcc tctctgcaaaagatacttaatcttaggcccacccttagagaggcccattggtcttgcaaa ctttatatgccccaatacaggggaacactagggccaaaaagtgggagtgggtgggtaggg gagtcggggtggggggagggtgtgggggacttttgggatagcattggaaatataaatgaa gaaaatgcctaattaaaaaaaaaaagaagtgggtatggttttatgcatccattttctgct gtgacaataaactgtttagaaccatggactgtctcttttcatcaagatatgttttgggga accatgaagaaggcatctgcttacagagccacatcttaatctcctttagaaggtctctct gtgtttccagccacaaccgccatcaagcctgcctctaccaatcagcccatgggacaagcc agagttcccctccccaccacaccccaggggatccctgagccagttttagctttttggacc tcttagattgtgctttcccaccccctgagaggtatctaggcacttccctacagctccgca tccacacctgtggcaaggtggggtaagcacagtcagacaccccacattcagcgaaccaga cagggaccagcagtgcattattaatattttataacaaaaaaagaaagactccccaaaaaa tgaaaggaagagagagagagagagagagagagagagagagagagagagaggaaggaagga aggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaaacctaatata cagtgatggtctccactgagagtaaattagatgagatactgctagacaaagatctcaaca acaaatatatcaaagaaattataaattcctggatgaatctcaaaaaatttaataaaataa aggcaatatagagactagagagatgatgcagcagttattagtaactggggcttgtggtgg tttgaacatgcttggcccagggagtagcactatttgGAGGTATGGCCTTGTTGGAATAPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.