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Mouse element [ mm1862 ]


Position: chr13:15,197,622-15,202,926 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: AW209491 - Gli3

Timepoints:
e11.5

Expression Pattern
branchial arch (4 out of 9 embryos) 
eye (7 out of 9 embryos) 
forebrain (5 out of 9 embryos) 
hindbrain (rhombencephalon) (5 out of 9 embryos) 
midbrain (mesencephalon) (8 out of 9 embryos) 
neural tube (7 out of 9 embryos) 

Embryo 8

Embryo 9

Embryo 10

Embryo 11

Fasta sequence
GTCTGGGTTTGGTGACTGTGTAtgggatggatccctaagtggggcagtgtctggatggcc
tttccttcagtctctgctccacactttgtctctgaatttcctcctgtgagtatttagttc
cctcctctaagaaggactgaagcatccacactttggtcttccttcttcttgagcttcata
tggtctgtgaattgtatcttgggtattccaagcatttgggctaatatcaatttatgagtg
agtgcataccatatgttttcttttgtgattgggttacctcactcagtatattttctagtt
ccatgcatttgtctaagaatttaatgaattcatcattttaagagctgagtagtactccat
tgtgtaaatgtatcacgttttctatatccattcctctgttgaaggacatctgggttcttt
ccagctccaggctatcataaataaggctgctatgaacatagaggagcatggaacactact
tttaaaagttcaacaatcatcaaaattaacaacatgataaaatccacatcaccagcgttg
gaggggggacttatattgtaccctaatattgtgaacctaagagacacagcaatacttctg
tggcaaatctgcacaaatatatgatggaaatataattgcaaagaagtaagaaataaacca
atttggacagatagcctgcacaaactaagaaactgcttcattttaaagaacctaaagaga
caaagatctaaatgcaaaggtttgatcagtgtttgttgactagttcatacaaaagtgaaa
gcaagtaggaatatatacaattacaattgctataaggatgaactataaaggtacaataag
tggtgttcacatgtcagttgcaaccagcaactgtttaattggacttcagtcccaccaaac
aggagggaatccatttctggtactggaaagctagccagcttactgaggttagtgaggtca
taaatcttagaacacaggctattcaccaccagttctcttgactggtataatttttactac
attctaaatcttaccactatattctcagataagtatagctaccatccctcctcagagaag
cctctctttaaaacaaatagagaccatcacagaaaaacacaacaggaaaaagtgtagaaa
tcaacccatcatggtggagcccagccccaagtggtagatccacacatcacagctcatgtg
tttacggctcaggaaatattgccaaaaagggaaagcgttgtagagttccttccattgtat
agccctactatcatcagtcagatttatgtccttgtatgcaatagaaaacctgggcatgaa
tatgaggcaagcacccaggtcccaatgtggtgctccatttccaatttacagctattgtca
aaactccatctttagaggaggctattggcacatagcttatagcgacctgaagctcaccat
cctcctgcctcagtcttgtcaatggcaggaatacaggcatgcacaactatgctcactgtt
attcaattctgataggtttgagaggttcagtatgaatagagagtgtagttagattacaaa
caacgtttcgagacgttttcttttacatgggacagaacagcaagagttgataaagtctta
cctctaagatgttttttaaatacatgttcaagtttcaataaggcttgtgcccattgaaca
cacattagggttcagtttctcggtgctcactgttgggaagcaggtctgtgagaggagttt
gaatgtagggaaagcaaggccctcagaaaacaattgagttcacactctcaaacagtagca
taaataaactttaaagtgggttgttgtgacacaaggtcatacctcaaacatttctattcc
agtaccattatccttctcctttctacctgagatctgctggtgccctgcccttgaattcat
agaaacatgagataaagcaagtctatttccttaagttctcacaatcctgtttcagtaaga
gaaaagaaactaagataatgaatttgaagatgctagtattgtctaagaatccctgatgaa
gcgatcattttcattttctacgacctcagtttgtggtactttcagtttgatattcagagt
cctccaagtgcaggcaacacctcctggcttcaccttcagaacagcggcatcctaaaatgc
ccagacagctttggagattggagcattgccaccacctgtgctttatttctttcagacaca
ctatcagggcactgcaaaagctttgcagcgatattcctggaggtctggagtttaaaagtc
ttttccctcttagataagagggaaagggagcaaagcggagcacattttgctccttttgaa
atcaaggacaaagggtaaagaaaatgcttttacagttctgtttagccatgctagtttgtt
agaggaaagttgtttaaagccggcctctgctcaatccaaatccctgtttagatagcacag
tcatctctccctgatccagctactcccaggctgcgttagcctccccctccattcctgtct
tgaggtcaggaagtgagtctcttgaactcatgctattttgacagagagcttaaggatacc
ttaacccagcaacgctggatgaagggtgagaggaccctgggtccaatgtgccagccctga
catgtttagctcagctccctaattgagaagctccccacaagcctccaaggagctgccgtg
tcctagagttgggagtagatttttctcttctcatctggataataagattttccaggtcac
caaagccacggaggcttggaaaacaaagccttctttgttaaacaaagcaagttgtattaa
gactttctgtctttgagtttaggtaaatgacccaaaaacatcatcaaatgattgtgactc
tcgagggatcttcatgaaaaaaaagggggcaccctgtgaaccctgagaagctaagaagac
tgcttttagttcaaatcccttctttgaaagatgtaaagttgggggctttgttccaaagaa
ttcagagaaataccacagagccaaaagcagcaacagactccctataaagcctgagaattt
taaatgcatttgtttttccagcgttaatatgacagattcatattttatataaactcaaga
agtagccagcattgtcatgtaagcagaattcagtgaggttttcttttttactttagtggt
gtgctctgctctgtatcaattaagatttcttagccaaggaagggagccagaaaaattttg
acaactagaaaactgtatttccacataaatgtggcatgatctcaatttctaacgaacata
gcaagataatgtactctgttagatacaggaagttattttctactgtgtcattatgagccc
tggcaaaccatggcaaccaagaagaaataaccttaaatgcataactctgagagttcttcc
aataggctttgagacttgaacatgagtgtatttgatctcttgagtagaaaggaacctgaa
ttaagagatctattgaaaataagacatgcctgttgaacacagacagctgcctcaccccct
acaaaaagctatttggcagtagtgaaatacttatgtgaatcttcgtgagacttgtattac
aagaagttggaagtttataagataccttctagtataagatacagtggcatcccactgtta
tttgaatctaaaatgtctgtcccccttcccccacaatgtcctcctagtgtacactaccac
gcagacaggcttgtgttttaaacaggctagtcctgaactctggtgagaatgttttgtgca
gttgtagaaattagataaccactttctgattggatttatatcctactccacaagatgaaa
cttatatgcggcaccattgtcaggccaagaacatacagctagacaaatcatagaccctaa
gagagaaacttctgctgttgttttgacaaatagacatagtattaaactaacttataatga
cttatttgtgacactgtatattaatgcattcttaaccctcaccagagaaggttctatttg
cagtagatgttgaaaaacacgaaaagtcactgaccaaggtggagagaataagttgatgcc
catcctagaggggacatttatgccacacctcctcttctcaagacttaaggtctattgtgg
aattgtggcagaaaaacttaaagagccataggtggtagatgaaaacaagaatgcagtatc
ctctagacaccacaggagagctttacatatgagctcgtggtgtttatgacagcatgcaca
agctcaagacagatgaaacctcagcatggattgggacataaatgtgagtttccaccctga
gctgaatagcttctgagagagttagtttcctgtgagactgttacccctgagaacttgacc
atgccaggcatccaataatatgtgagtagcacaagttagaattgatggattaaaaaaaga
aaaagaaaaccaaaaggagacaaattcagatggatagggaaataggatgagcctgagatg
agttgagcaaaaagtaaatatgatcaaaatacattagacaaaattatcaaggaattaatg
aacatattaaagactttctcaactattaatgtttccatgtcttttcataatgtatataaa
ttttacaaaacctttttctggaatacagttagaaaataatttaaccaatttctagccaaa
tagtattcaataaaataaaagcattttttaacccctacttctcaaataaagtagaagcag
tatccactgaaattgtagtgcccagcctaggaaacctcccgttgagttgttggacagaag
tgtctaagagactcataaaacaatacaggctagtgttctacttgccttcctgaaatcaaa
ggcagaactacatggctgaagacaccatataacttggacaggggacatggaagaatggag
ctggaattgacatagaatcctcctccctgagagttagctctcatagtatctaaagggact
tttcaagctaccaagggaaaaggcaagtaacagtcttacccagctataaagcttacagac
tacaatgtgcagcatgacaagatattccccagggtggagtagtggcgcttacatttgtgg
ggtaatcaataactatctaattggacttgaagccttctcaataggagggaactcatgcct
gacactataaacctagtgactataaggcaggtgagagcctactacttttactttcctaag
caggtataatttccaattgtattctaaatacttattcttatatccacagataagtttatc
accTCTAAGGACCTCCTTTTTGCAG
Primer
(+)GTCTGGGTTTGGTGACTGTGTA
(+)CTGCAAAAAGGAGGTCCTTAGA


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