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Mouse element [ mm1859 ]


Position: chr13:15,171,261-15,176,448 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: AW209491 - Gli3

Timepoints:
e11.5

Reproducible pattern in likely ectodermal tissue.

Expression Pattern
branchial arch (4 out of 5 embryos) 
limb (5 out of 5 embryos) 
other (5 out of 5 embryos) 

Embryo 1

Embryo 2

Embryo 3

Embryo 4

Embryo 5

Fasta sequence
AGCTGGTCACCCTTCTGTGTATaattatacttccagaaagcaaacacttggctgctggta
tttctaatgcatattagtattcctggcactgccgggattcttattgaaggatgccattgc
ttcccatattccgagagaatgaggctgatgagttgtttgccacatgtgtgtgaaataaga
aatttatcatcttgagaaatatttgtatggatattgttttcacaacctgactacagattt
gttgctgtctggaatgctggctccccagcttgtaaattgcctaatgcaaatgtcctcctc
cccttttctgccctgtgccaccaatttttctcagcctgctgagttgcagtagcttccctc
tccatgggtttgtaagagctatgcagtcatgccaatatcatatttcattagcatgcctga
cttgaaggtttcctgccacagtggcttttaaatccttagatcacttggtttccatctgtt
ccaatgaataggcttttcttgaattactttgactaggcagtaattcagtactgaacaatc
cataagcatcaatcataataagtttgtcaacagctctactgtaatcactctcttctcttt
tcaaatgatgatcctcccactggagtatgtatttagattactctttgaaaatataggtga
accaccatagtctctgttctgatgaaccaaaaatggtcaggaaatagagtctcatttctt
ataaagaaaatgcttacagctggattctgaactgaccagtgataagtgcttgagactaag
caggcttcagcatcacttggtcgggggcagagcataagaaaaggcagactactgggtcca
cctaaaaattttgatttagcaggtcttggtggagtacaagtttttccctttatagtaaat
tgcacctgaccctatggttttagactgtatttttggaatgacgtttttagagaatttcta
aatttggcatttggtacagacttaattatttttacaaggaaaggagaatgtggggtcacc
aagatgtttcattcatagtgaatttatctgagtaatatctgatggctggtagagaactga
aatgatctctatggtttaggattggtaaagcccaaacatcaggatgggacccctacaaaa
ccccaaatcgaacaaatacaattatagttaaagtagaggtaaaaggtagaaagaggagaa
agtaagctggaagcatacaaggctcatctgggcacctgtcctgccgtgcacagtgctgct
acacaggttaactgttttaaagcttgatacaagttacagttatctgggaaggaacatcaa
ctaagaaaatccattcatgagctaggcatgtaggcaagtctgtggagcattttcttgatt
aatgactgatatggggtagggcagaatactttggacggtgctttaggtaactggtccaag
gttaaacaagaaagtatcttatttaggattcctattggtgtaacaaaataccatgatgaa
aatcaacttggagatgaaatggtttgttttacctcacagcttgtagaccatcatgcaaag
aaatcagggcaggacctcatggcaagaagctggagacaggaattgggaactgacgcagtt
atcagtgatggaagaatgcagattattgacttgcccctcttgataagtctctatcaggat
gatttgtacaattgtttgaactataaatatgtggtttctggttctataaggctgaataat
cagctatgattaacaagaaaccagaaccattgaagtgaaaccttcggtttacagggacaa
tcaatatttggttatctgaggctgaaaaactagctataaacaataagagattaatatcac
tgaggcaaaatctcctgcaaagtatttcctatgggaaaaaaaggtgtggcagagaaggtg
aaagctgcagctcaagctgggagcccaacttggtaaatatataaatgtttcctacatatt
tttacttgttttggaagcagctacagggataggggtcacggagagcagctgagtcttcac
attatgggaagcaaagaaaggccactggttaaggtcagcttctgttgcagtacaaacctc
gggagtgaaggcagaatgaagaacagcaacagcttggcagcgttagaatgaggcagaatt
agaatccctaaatttggacccggtggccactcataaaggtgaagtctcagttgtaatgga
ggtcccaggatttgaaaagattatggagagaaaaatttagccttagcatggtgtggcaga
attgcagtccctgaagagaccattattggggaaggcataatctctgttggggtaaaatcc
ctaggcttctggagcccagaagatcatgtgtgagttccaggcattgcacaccgagtttac
aacacaattgtgttttggttttgctatattttcttagcaaatggtcttttgtaacgatag
aaatttagggatttgatctcaaagtatatatagtaaggtgaaggggttttttaactgatt
cactacaaactttcagagagaagtacttgcttctgggacctagcacttttatataagaat
aaatgtaccaccaaaggtataaagaagaaccaaccaattagagataaatttgctcattgt
tcaactgtcttaaaagcagttctgatttcaaattcttttaattccatcagatactttaaa
acaagttttaaaatatttcagtttattttcatcctacaacatgtggttaggtttgtttgt
ttgtttgtttgtttggaggggagggggtacatctcagaaactttggagaaattgcattag
agtaatagtaatgaaccatcaagatctgccggtttcttccacctctgatgttattctgtg
gattcttcttcttttctcatactccaacctccaccaagttccagtgattggtacttctgt
ctaaagagagtatatttgatggaggtgaaattataaaacaacccaaatgactgaggcaag
gctgtactcagaaacgcatattcttactgataaaaacattttcttcttgtaattatatct
tcctcagattgaatcacccaaagatattccccagatcttacgatagtggatttctagata
cccactcctgcctaaacatatctaaagcttacactcaaacttataaatcaaagggagaaa
agatagtaccatcgatatcgtgcatgtctgaagtgttgtatatttatgcaatcattgacc
tcaccttatatcagaaaaatggaaaaacattttctataaaatatctaatagtaaatgttt
agctttgtggtctacctgttctgcatcaaaattactaaacacatctattatagcctcaaa
gtacccattgacaatatggaaataagtgaacatgtctatgttctagtaagatcctattcc
taaaaataggccaggtttccttagcaggctttattgtaccaacctctgttccatgtatat
aaatatttccagtttttcttaaagtataaatgaaatgcttgcaactaatttttctaaagc
acatactaaaaacaaaacatttgcttgagattttgttgctgttgttttgggtcttccatt
cagatttcaatgatttatatttaggagttgctgaaacatgcctttctggtctcacatagc
agtgagcttgcaagcttttgatatgaagagtctggaaaatgtttatttagtgcagtcatt
ctgccaaagctaagtaggtgtttctcaacttcccgcccaaacaccaaaattaaacacatg
cttaactctacatcatgcacacagaaagagatagtgaaattgcctgcttctttcactgtt
cctttaatgtctagcaattctttaagcccaaacattcctgagtatagtttataccaagat
tttttcatttcttcttctagtaggtagccaaaacgtctctataaaaagttctttaagtgt
agacttttctctccatttcttctccacttctagctccagtctttgataattatataaaaa
tctatatgtatgcgtaataaaattaattttaaaaagtgatgaagaagtaaatacatatac
aactatatcatgtaagtgggtctcaagactggagacatagttcatcttccttattagcat
gcaataaagcgtgagatatgatgtaagagtctgacatcactccttgatatttgcatactc
atgtgtttcatatggagaaagatttaaggccatgaagtcatgtgtttgaatacttggtcc
ccagttgattgcactgtttgagaaacattaggtggtatggccttgttggaaaaggtatgt
tactgggggcaagtttagagtttcaaaagatgtatacaatccccattgtctccccttctc
tgcctgtggtttactctagatgtgacttctcagctactactcaatttcttcattactact
tgcccatttccatgcccctgagccccatgatgggccatggaatctaaatcctttaaaact
ataacccctaaattaaaagctttttgaaaagtaacattagtcatggtgttttatcacagc
attagaaagtaactaagacattaacgtatctgataaaagctaggaataaatttattttca
taagaaaaaaatttttgcttaataaaaacactgtaaaactgagaacaaaagaagtgaaat
ttatgaacagaaacttcatagaaaaattataccaaaaaggaaaagtttttctttttagtt
cttccaaatatttatttaaagggaaatgggtttataagtaatacaattattcacaagagt
tctctttacaattctgcaggtttttcttgtctggggagtatgctaggaatgtcttcttca
taagatttgtaccttggagctagcctgcctgagcttgctcacctgtaaacagcctcccta
aagtaaatgtgcaagctgccccacaaaactttctttgcactcctgagagtagaaacacca
tttccataccatgtaaaaacaaaacaaaaacaaacaaacaaacaaaaaacaaaacagaaa
agccacagtgagtgtgacttatatccagaatctaaacatatgggaagaccctctagcacc
agtcactttcatctacagatctacactttttttctctaaggaactctagaatgaaataca
aaggaaCAGGTTCAAGAAAACCATCACA
Primer
(+)agctggtcacccttctgtgtat
(+)TGTGATGGTTTTCTTGAACCTG


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