Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs1859 ]


Position: chr11:8,226,046-8,230,683 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: RIC3 - LMO1

Timepoints:
e11.5

Expression Pattern
blood vessels (5 out of 8 embryos) 
forebrain (8 out of 8 embryos) 
heart (7 out of 8 embryos) 
hindbrain (rhombencephalon) (5 out of 8 embryos) 
liver (4 out of 8 embryos) 
midbrain (mesencephalon) (8 out of 8 embryos) 
neural tube (8 out of 8 embryos) 

Embryo 1



Embryo 2


Embryo 3


Embryo 4


Fasta sequence
AGTCATCTGCCGAGGACAACataatcctaagcttagagccatccgttgcttggaccaact
ttgcctcactaaccccccatggcccctgtggctgaggtcctgtcacctgctgatacccag
agttccctgtacctggccctgttccaggaagagcatggctcttgaattcctctcaccaag
ctccactgtgttggatgaggggcgctgaggctgggtgcattatgcctggtgtttgcccct
taccttacggcctccttgttcctattgcttgactggctcctattcaacacctgagagaag
gtggggtgcagtcaggatgggggactctccctacccacctcatctaagctaactccaagt
ccagatcccaccaaagctctcctgcctcagtgaagcggtcctgctcattcatatgcagag
gcatgaccaagctggtccccaaaggcttgcggctggaacatgtggggctgggttgggaga
aggcagagccacgggattctcagctctacctgagagggcaggccaggaagggtgcagtga
taaagagtgcagtgaagtgagagaagacagggcaggacgagaatgtaggggaccgaagaa
acactcagaaaacctgaccccatgatttgagccctagtaagacaataaagtcccctccac
cttctttttccctaacttccttttctttcttctcctcccttctccttccatttgctaagg
ggatgtgctgagactcagctttgctatgggtctcacggtatctaggggctagcctgggag
cccacctcccatgtggaacgttgtttctatcaaacatgcatctggaaggctcacaactgt
aatcccaacactttgggaagccaaggcaagaggatcacttgaggccagggtttgaaataa
gcctgggtaacatagtgagaccccatctctacaaaaaaattctttttaaattagccagac
atagtggcatgcacctgtagtcccagctacttgggaggctaaggggaggatcacttgagc
ccaggaatttaaggctgcagtgagctatgatcacaccactgcactccagcctaggtgaca
gagcaagacactgattcagaaaaatagaaaatgcattctaactccctgtggatttctgga
gcccaagtcccgtatagccagaacttgtctacactgtttgacatgcgcaaccttgttcca
ccctgggcaggacccccatgggcacgaccatggcagccggtatccctgtctctttgctgg
ccagttctagtgttcccagagtaccttgtgctcagggtgcggctgagggaaaatgaccct
acaccgcaggacccaggaatttgtatatttaattctccctctcccaggtgggagcctgtg
ttaagacacagccaagggtgggaaccctgatctcgataactgcatctcaaacttcagcgt
gcccttatcagagtcatctagggcaattaataaaacatagactcctagaccccatttcca
gagactcagattcaggaggtctgaagtgggcctgagcatttgtgtttctaacaagctcgc
agatgctggatgctgcaagtccatggaccacacttagagtaacaagggtctgatgcaacc
tcccattttcctgagacaaagaccgcactgagagcaaagcagggcaggggataccagcgg
cccacccaaacgcccaagtctttgagggctcaggttcccactttaggaggacaacaaaac
ttacgccaaaccgaagcgggccttgttcctgcatgttgggcctctggcctggcccagaag
actgggccatcaagagtgttaaccgctgccattggctggtccttcactgacagcagaaac
ttggccaatggcaatcaatcagggggcccgcgctgccttaaataccagcagagcaaacag
cctcagacaaagctgcgccgtgtatcaattaccgagaggctgcgtgctcctctgggcgga
gggagccggagcgagcggccagggctgctgccccagctgataagggcccgcattgttcgg
ggacagctggcagcccgataagggcctgctcgcccgagataatggcagtgggcaggcgcc
tcgcggcagtttagaatttcttgggtctccaagaaaggttctattaagcccactgacccc
aattgaatattaattagctaattaacggatttattgttccacgccatttctggagaggcc
attttttttcgagtgccattatttttgtaaatgatttttcgcattgttcataattgaatc
tttgcagctgccagcatcttctgcatgatttggcaaaaaaaaggaagcagaagcacttag
ggtttttccccccaccctccctctgaacaaatgttttcagcccctcctgctaatgctgga
gcgagggggaagtaggggggctgtctctgtttcacgggtttgttttttaagccgaactgc
aacgtctgcactcctttttccttccttttgtgggcagctgagggccgaggcactccgtgc
tgtccccaccagccctttgtctggccgtcttcaaagtactcagacttagcttttctcagc
ccaaacttcttaaagcattgtgctttctattagggaatacatagagggaacaagacccga
gcttgtcccacctcgagctcccggtggagggaggccagccctgaactgccaggggaggag
ctctagccagctggggagcactcctggtgggctctgcctgggttcctgtccctatctatc
ccacccttgcctttcctagctggagcccaccctgggtctggtggctctgggggtacagag
cccccatcccagagcctctccgctgctctttaataagtctttgctccaaattccgcacca
gggttgcttgactccctggcgctggcatctgcccacaataagttgaaccagacggtccca
caggcaaatggctgattgaatcaaacccattcctctgcagagggtctagaagagggaggg
tatgtgtgctgggatggggctggcgtgggcggcatagcaatatcgtcaggcagcaatggg
gagccccgttggacctcgtagacccttcttcagcatcattaatgaagccaggggcaggca
gaggctccaggaatattagtcagggcccccctgtgggcgggtctaaggaaggctcatgcc
caggacctgcacctggccgccgggggctgcagaactttattgggattttttattaagctg
cctcttcctgccgtcatccctgtccctatcctgctgtttgtgctcaaaaagaggaattcc
gagggcgtttgtgagcagggagatgagtcaggaaggagttcttgagtcttcctctgtagg
cactggctgggaccacccatttcctttcctctggaatagaatccagcagacagacagact
gtcctgggaatctcctccaggtgcaaaagttgtcgaagaaactatatgagataatccgta
tgttaattagccagatttagtcactccacaatgtatatattcttcaaaacgtcatgctgt
acatggtaaatgcatactttttttcctgtcaattaaagaaaagttgtagaagggacccca
aaagtctaagaactgaaggtggcccttagagttggggaggggagtcattcagcctctgaa
cacctccagggtgggaagctcactaccatcaaagctttcatatggagaagggtcgtcctt
acacagagtctgtatgctcttccctataccccacccatacagtctccctctgctcatgac
acccattcagctaataatagtaacaaccataataacacctaacgtgaagtgaggatctac
tacgtgccagacgctgttctaggtactttaatgcattatcccatgtagtcttcctcatgt
ctctgtgggatttttttttttttttttgagatgtagtctggctgtgtcacccaggctgga
gtgtagtggcacaatcttagctcacttgcaagcaagctctgcctcccaggttcatgtcat
tctcctgcctcagcctcatgagtatctgggactacaggggcccggcactatgtccggctt
ttcttttttctttttttttttttttgtatttttagtagagatggggtttcactgtcttag
ccaggatggtctcgatctcctgaccttgtgatctgcccacctccacctcccgaagtgctg
ggattacaggcgtgagccaccgcgctcggctggtaggtaggattctgaggcagagagatg
tgaagtaagctatgcaaggtcactgatgaaagtaacagagccagacaccaacccaacgtt
gctggataccagtgcccccacatgtgacctctctgctccacagtctggaaagccatggct
ctaagactgctctgctgcggggaagacaagctaagaggctgtaggtgcttctcatctgac
agggtctcccttccctttgctgccttggaccttcctcctgaagcccaaagtccataggcg
atctggctggaagacagcctgttcctttccatgttctagacactatactctgttaatgca
gcctgggttggtgataaagttcttggtgaggggttgcacccctctacagcaccccCCTTA
CCCTCCGAGGTTCAGact
Primer
(+)agtcatctgccgaggacaac
(+)cacctgaacctcggagggtaagg


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.