Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1858 ]


Position: chr13:15,162,920-15,167,629 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: AW209491 - Gli3

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CGACAAACATCAAGAACTCAGGtgatagcagatgctggcaaggatgtggagaaagaggaa
cactcctccattgttggtggaattgcaagcttgtacaaccactctggaaatcagtctgct
gctttgtcagaaaattggacatagtactacctgaggactcagctataccactcccgggca
taaagccaaaagatgctccaagatataacaaggacacatgctccactatgttcatggcag
ccttatttataatagccagaagctggaaacaacccagatgtccctcaacagaggaatgga
tacagaaagtgtggtacatttacacaatttacagctattaaaatcaatgaattcatgaaa
ttcttaggcaaatggatggaacttgaaaatatcctgagtgaagtaagagtcacaaaagaa
cacacatggtatgtactcactgataagtggatattaggcaaaaaactcagaaaacccatg
atacaacttacagaccatatgaaggtcaagaagaaggaaggcccaagtgtggatgcctca
gtactacttgaagtgtgaacaaaataatcatgggaggtagagggtgggcaggacttggga
gcaagagagaaggaggagaggaaaggagggcaggatcaggtgtgggaggagacaggggag
atgtacagaaggtcagtacattgaatagaggtgtgtagcaatgggggatgaggaacagga
ggtagccaacagaaagtgccagatgtcaggaaagcaagaggttcctaggacccaacggag
atgacattagctgacatacccaacaaaggtgagagagaatctgtaaaggccataaacaga
ggttaggcttggcccctgattgagggaaggggccacccacccttctcaaaattttaaccc
agacttactcctgtctaaaggaagtatggagacaaagagtggagtagagactgaaagaaa
ggccatccagaaactgcctcacctggggaaacatcccatctgtagactttaaacccagac
actattgctgattccaagaagtgcttgctgacaggagcctgttaggggtgtctcctgaga
ggctttgccagaaccttatctatagagaggtggacgcttgcagccaaccattgcactgag
caggaggactccaatggaggagttaggggaaggactgaagggactgaaggggtttgcaac
ccataggaagaacaacaatatcaacaaaccagatccttctgagcttccagggactaaact
accaaccaaagaatggctccagctgcatatgtagcagaggatggccttgtctggcatcaa
agggagagcagggccttggtcttgtgaatgcctgatgcccagcgtaggggaatcctagga
cagtgggtgggtttgggagtactctcttggaggcagggagaggaagggtgggttggaagg
tttttggagaggaaaccaggaagggtaataacacttgaataaacaaataagcaaaataac
caatataaattttaaaaaatcatagagagggtaggaatggaaagaatataccttgacatg
ataatgactattcattacaaacttatatccaacactattcaaaatgaaaacaagctaaat
gcatttgcactaaggtcaggaatatgacgaagatgtcactttcttcactctattgaatac
agtgcttgaagtattagctagagcaaggagataaagaaacaaaagatacacaaataagaa
aattcaagctattgctttttatagctggtatgaccttatataaaaaaagccctaatgact
tcatcaaaaatctcttagccctgagaaacattttttgcaaagtagcaggatacaaaatta
gtacagaaattagtagcatttctatgtgccactgtcaaatatactagcaaagaaattgat
caaagtatttaacagtggctaccaagactatcatacctaagaataaacataaccgtgagt
atgaaatactgcgatatgaaatatttaagacattgaaaatggatattaaggaaaacactt
gtactggctagttctgtgtcaacttgacacagctggagttatcacagagaaaggagcttc
agttgaggaaatgcctccatgagatccaactgtaaggcattttctcaattagtgatcaag
ggggaaagtccccttgtgggtgggaccatctgtgggctggcagtcttgggttttataaga
gagcaggctgagcaagccagtaaagaacatccctccatggcatcggcatcagctcctgct
ccctgacctgcttgaatttcagtcctgacttctttcagtgatgaacagcagtatggaagt
gtaagccaaataaaccctttcctcccaccttgcttcttggtcatgatgtttgtgcaggaa
taaaaaccctgactaagacaacactaaaagatggaaagatttcttatgctcatgaattga
aacaattaatattatgaaaatgatcatttttctaaaggaaatctacacattcaatgtaat
cccaatcaaaattatagggaaattcttcacagagaaaaacaaaacagaactgtaacttta
atttttttcaaaacttgtttttaatgatggttcttcaatgctttaatctcccttttagcc
caccacccactagagggagtgggaaagaaaggatatggaaacagtgggtctatttagaaa
ggttctttggaacaactcctgtctgcgttgtctggaaaccggaagttcagtttacaggtc
agcagcagcagctcaatccactggaaaatacttcacagatacatcagcactctgtttcgg
tagagctgggagagcaaacatgaatcagcagtggtggtcctacctagcagagacagccag
gccttagcatgggcacaagtcagcaggaacatccaggatgcatgccaggagttttcagct
gtgcctctcggtgaagctaagattaacaaagatgaaaaaccaacaaccatcaatgggagg
agaggcctttggtattgcgaagatcatatgccccagtacaggggaatgccagggccagaa
agcaggagtgtgtcgctaccgtctccgaccagcagaaaagaagcaacgaaactgatgtcc
ttctcaaggcagtttattcaggaacttcataaatgtgtaggtaaaagaataatgccccta
cctctctcggccactccccctcaccccagtccatgtaggcacagttcattggctcaggac
tacatttgccacatcatccaatcttacatcgtggtgcatctgcgcaatgcagctcaaggt
acgtggcaatcttgagggatatgggaagtcaggtgccagtcataagacttggcagcagtc
ccgggcgccatcttagggctgcagccacacctgctcctcacaggagtgggtgggttgggg
agcaaggcggagggggtggcaggtataggggactttggggctagcatttgaaatgtaaat
gaagaaaatatctaataaaaaaaaagaaaaactaacaatcattgcatagctagctctata
agcaagcctagatcagcaagcacaacatggcatcagtaatagtgcctaagtttggtgtca
gtctttggatgacctttcctttaatctctgcttcattttttgtcagtgaatttcctttaa
acaggagcaattctaggtcaaggaatttgaatatgggtggctggttccatgtctcaaatg
ggggccatgtctatctactggaggtgatctcttgccccatcttcctgttcctaacaaatc
tctaagtgcagaaacatttacacattcacattttgttgggttttctcaactttacacaca
ctagactcattttgaaagaaagaacctcaaccaagaaattgcttcgattggattgaccta
cggggcattttattgattattgattgattgggggacccagcccactattgggagagatgc
catccctgagcagaaagtcctgagttgtataaaaagcaagcaaagcaatcttcgaagaac
aagccagtaagcagcactcctcatagtttctgcttctgatcctgcttgagtgactgcctt
ggttttgcacaaatatcaactatagcctacaggataacataaaccttctgttctccaagc
tttcttggggggggggggggtcatggtgtttataatgacaatgagaaattgttattagga
tcatacggtgttgctgtgatggacctaaccatgttttgttttgttattgttgtttggggg
ggggcatggggttagtattgtggaaagattttggagctgtaagctagaaaaaaatgttaa
aatttcagagattattaagtagttacaaagcttggaaaatagagagatgtaaatgttgga
ggcctggcttataaagttctagaggaaagcaaagactttcagggatgttcatataatgtt
tctaaggctaaagaatcagctctgattatcaagatatcaccaccagagggctggagaggt
ggctcagcagttaagagcactggctgctcttccagaggtcctgagttcaattcccagcaa
ccacatggtggctcccaaccatctgtaatggggtctggtgccctcttctggtgtgtctga
agagagcaatggtggtgtactcatatgcataaaataaatttttaaaaaatgaaatacttt
taaaaaaaCGGTATCAGCATCATTGAGGTA
Primer
(+)cgacaaacatcaagaactcagg
(+)TACCTCAATGATGCTGATACCG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.