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Human element [ hs1857 ]


Position: chr1:44,500,383-44,503,337 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: SLC6A9 - KLF17

Timepoints:
e11.5

Expression Pattern
midbrain (mesencephalon) (5 out of 5 embryos) 

Embryo 1

Embryo 3

Embryo 5

Fasta sequence
TGGCTCCAGGTAAAATCAGGcatatagacaggaagtattgactttggcgttgtccaaggg
gcagccccaatctccagagctttcaacacccagactcctcaatcgctttgagctcccaaa
gtcctgaattcccaatgtcaagggtgccagagcacccaacactgtagaggacccaaaacc
cagagcccccagtgccaaattccagggggcctggggtacccaacatccagagcacccaat
gttcataacattccattttcagagtgccagtgttccaattcactgcacctggagggaggg
agtggggtccctgcataaccagggtccctacataaccgaggtcccttcagtgacctatta
tctgaggagtggccatgactgaagttggggctggggtggtgctggcagttgtagttcttc
ctcgatgctcccatcctgggtctggagaggtcgagcaggcttgcaggtgggatggcgttc
cctctggcctcagcccagcctggtcacaggccctgtggcactgaatgtccatttattcac
tcaccaaatattagtgcgcatctgccatgtgctgggaattgagctcctctctgggagtac
aaccgtgagagagaaggggttcctgttctcccagatgggacaggtgacattgtgcctgtg
ctggtatgtccgtgtggttcagccatctgtggcccacgtgtagctgtgggcatggctatg
agaatgaatggctgtgagtgtgatggtgttggcgtgaggctgtgcctgcagcccacatca
gcaagttaatgtgtgtgactattatggtgggtctggctgtgtccgtctgtctggccatcc
taataatctctctttgcctcactgctatttcaaggattggaagtaaggccccccttcccc
tcagacccgaggtactgagggtcaggcctcactgtagggaggaacaggctggttcctgag
ctagagactgaccccagagctgccctgctgcagggctaaagatttctcctactgctcctg
cccctgctggacccagagcctctttggattgggaagacaggaagaggggtggctataagc
cgagcagtcgacaccaaaaatagccatctgccctggggaggatcctctggcaccactctc
tcctccagtccagcccaacccggcccactgacttggagcctcagtagggctcctgtctga
ctccacttccccaactcttatctgagtaaccctctcagactcaaaggagggacacagcaa
tgatgtcactacaaattatggcatcataaagagctctggcagcatcacaaggagtgaccc
cagaccgcgggcggggctccatctgctggtagctccccagcagggatggcagggctggat
aagccctgcgtggggccctgccttatctgtcccccacacatatgtgataagcctcttacc
atgggctggcccagggagcaggtggggagcaggccggaagaggggaaaggccagctgggg
ctggctgaactccagggaagaaagccagggtcagggagtcctggcagaaccccagcaagg
ggagatgcagggtcactgttgggggcagtgtggagctgtggttagggccatggattctga
agccaggctgcctgcatttgtattccaggtctccacttaatggctatgtaagcagacctc
agcttcctcaatattcctcaccaggaatactattaatattagcagtgactatcaaccacg
gtattgttgtggggattaaaggatttaatgtgtgtgaaatcggcacagaagagggcctgg
ctcacagaaagccctcatccatcctccttcctagatctgatcttccctgggagctgccca
ccatacccaacagcccacttgtgtggccggggcctaggtggggttcccaaaagctgccca
gccccacacacatcccacacctaccctgtctgtaatcaccctgaaactccccaggaatcc
tggccttttcagcatattttcttccagcaatctccccagacacattgtggccctggtgcc
ctctggtgacaaaagccatacatggcagttacagctgcatccccagcacacattgggcca
gacaaggtgctgccccttgtctgattattttgtgtcatcacatcaagttttcaaagtagg
aattttctgtgttttctagaatgagagctcaggcaggttaactaatttgctgcaggttat
agaactaataagtggtagaacgtgaacttggattcaggttggcctgtgtccaaaacgtga
acttgaattcaggttggcctgtgtccaaaagctattatttcaccccatgcacaatatact
aggggggatgtgctggcatggccacggggcccagtagatgttttacattatgagccattc
tcctagtttgagtatatctatagttgagtgtatggccattgagattctccatctgtgaat
atagagcagtgtgacctggttttgagcacaataaggttgggtgttggcttttttgtggct
ctgttgtggctgtatgattggattgtgtgagtgcaaccatggctgggcttgttgtgagag
attagccatggtgtgtggggctggcctgactctgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtcggtatgactgtattgtggaggggtgtatagccagtgggattgtgtggggaaagg
tgacgaagggccctgagttcccagcgccacttgcctttttggtcccaggcctgcatctgc
tcaccatgactgcatgatggatggcttcacatgccaaacacgctcccaggggcctactcg
ggttctccttcccccaaccccccttttatttttcgaggaagtaaagcaaatagtaccaca
gatggagttggtcttccttttttccatgggatatttgtgaaagcattttACATGCCTTTG
AGTGATATCGAaaaa
Primer
(+)tggctccaggtaaaatcagg
(+)cacctcgatatcactcaaaggcatgt


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