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Human element [ hs1828 ]


Position: chr5:172,198,673-172,201,009 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: DUSP1 - ERGIC1

Timepoints:
e11.5

Expression Pattern
hindbrain (rhombencephalon) (5 out of 11 embryos) 
neural tube (5 out of 11 embryos) 

Embryo 1


Embryo 2


Embryo 4


Embryo 5


Fasta sequence
ACTCTTGTGCCCCTTTTCCTcatttcctcatcactaacaggcggggaaactgaggttccc
caggcgaagcgactgacttgcccagaaccacactactggggtgggggcagcaaataggcg
cctaagatgaagtttagagaaaaatgaacaactctgccgatagaaaagtcgtccctacca
agaccgactcgagcgagttggggcggagaggttcagggcaatgctttcctgtttcccaga
cttttctttaaggtggctttaaaatatctacatttgccatgaaagtgtgagcaagcaaac
tcccaccgggaaataatgctattcctagtcttgtggcccccggaagacttggagccaagg
gaggcaggtcagggggctgaaatcccggtgaggggtcgcaaggccccgcagtggattcca
gggtttggcgtttggaggggtgaggggcgacccgcagcgcgactcgacggcgccccccag
gggccgcccgacacgtttctgtcaccttggctccagactgagcttctccatccctttctt
tattatacaaataggcagtatacacagtgagcgcccactaagcgctgggctgggggcctc
caacccggaacagaagccggccacaaccctcgctccctgtcgtcgcggccgttataggcc
gaaagcaaaatccaatcccgggccattgtgggcggattgccaggacctggatcgcaacac
ttgggaagacccccgccccgcccagcgatctccgtgccctgagtcccagtgacggccccc
tggacagcggagcctgctgcagcgacgcgacgcgctgggtacacaaacataaacattgcg
ccacccgcccgggtgccgagtcaggaacattctgcggtttcctcccctcctgggggaggg
gatttcgctggccaccctgtgtcgtcgctgtgcgagctgtatcaccagtggcaacttctg
catttgcctcgcttagcttgtgtgttttcgcctgcgcaaatgttctgcctggattcttct
agaaaagttcagggcatggagtgcttttttttttaaaagggcgtcttctaccttcatttg
aacattggtcgaggacagcaaagaggtcctcagataagggcaacgccctccctgtatgga
gagatagaagaaaaagaaattgtttatactacttattcagctgaggaactcaacatagtt
tttgcgttgaatcatagaatgttacagctgctgacttttcactgcataccgacttgattt
gtcccattttttttctcaccaagagcatttattataccttcccctaccgaaatttttcaa
aaagaaaactttttaagagctgggcgctgtggctcacacctgtaatcccagcacttcggg
aggccgtgggggggcggatcatgaggtcaggagatcgagaccatcctggccaacatggtg
aaaccctgtctctactaaaaatacaaaaattagttgggtgtggtggtgggcgcctgtaat
cccagttactcgagagcctgaggctgaacccgggaggcagaggttgcagtgagccaagat
cacaccactgcactccagcctggtgacagagcaagactctgtctcaaaaaaaaaaaagaa
aagaaaactttttaatgccgttatcatagtagtagtggcgcagtctggccctagagccag
gtgtctgctggcctctcctgcttttctctctcctcccttgctggaaagagtgcagagagt
agacttgaaccctgtcattttgctgctggatggtcagaggtgagtctcgacccctactga
gcctccaaacccacgtctgtacagtgcgtctacactggcccactttgtagatggtttgag
gcccaagtgagagatggggggtttagggaactcaggccctacctcacccctgctctttat
gattcactgtatctctagggtttccccttcccagcagaatggttctttatatatcatcat
gcccctgtgcctttcagagacttgcctcagaaccagggagaaggtcactgcaagccatct
gcttatgagatacatcagtggacaggggcccaactcaggcagagctcctctttaaggccc
actaacacacagtgctcgggccagtgggtcacctgcccggcgacaagtggtaaacgtgta
gccacctaggcccccaatccaggcagtggagatgctgcttctgactgaggatggagccaa
agagagcccagcataatctggtctctgtaaccacagaaggagtgagggactggccttgtg
ggcctggctgccagagggagtgaagcagataaatcAGTGGATGTTGACTCAGGGGaG
Primer
(+)actcttgtgccccttttcct
(+)cacccctgagtcaacatccact


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