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Mouse element [ mm1825 ]


Position: chr13:15,643,546-15,645,536 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gli3(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCTTTAGAACTCGGTGCTCAGTagcctctctgtaggctattcaggcctctctcctgtgtt
tgccagctctttgagacagttggatagaaaagtctccatgagtccaatgtcagtaattcc
ttcgattctccatggttggaaaatgtagacttctcaaaatgcctaatttgtgcttctata
tatactaattttgtatttctaaagtgtgggtaggtttcctgtaagacaagcaacggggga
aaaacccaaaacatctttttcccttctgaaggacatatgtaaaatttttattgcataaga
tcttattataatgggtatgcagtacttcatcctcaacaaactatagttaggcagaattca
aagtattttagagtttgtgggtttgacttaaaaaatatgaaaagaaaagaaagaagaaag
cctagggatagcgggcacttcaaacattcccaacatgtgtttggaataaaatccacacgg
tggggaggggtggggtgttctctcatgaagggtagctgtagatgggctgtatatcagggc
aagagaacaagcatgcaagttgcatggctcagacatgatatggtgctaacagcctcttgg
ccacagtatcattcgcatgttatagtttgggctaccttgaggggggtggcagatttaggg
atcctatctgcttataccagagtcaggctaagagactccatctcttgcccccaaggattg
ctgagcaaagtttctctcctgctgctccatctgtagccagatatttcaagtcaccatcac
ccgctgctttcatttagtgccgtacatttattgttttataaacctggaaaggcaggtgac
ataatagttcaagcattctttctaccctgagtgacactaacttttattctcttccctttt
accaaaaacatgtgtctcactgtcttccttctcacttcccagggtgtagtgttgtagctg
tctctgtagggttctgtgtgtgtgaaatttgttggagtcactgagcatgtcatagaaggt
ctcgtttttttcttttttaatggagctgaaagattccttctctttcagaagttcaggtct
ccatcatagttttatagttatgcacagcctgcttgtttttcctgtaccccccccccaccg
ctcccaaatagtaattcttcatggaaaatatgatgcattcttgcatgcaaatgctttgat
tgaaaacacaccactggtattctcccttatgttatccagctcaaatgacagaactattag
ttgctaattagcaaaacctgaggaattagcttaaagaaaagaaatggaatttttaattgg
cttgcatttattttctgtagaaagctattgtgctgagcccacttgtagtcttgtgtgctt
aaaaaaaatttttttaaaaagcacatgcaaagtgttttgctttgtttgttttttttctta
cctgtccgtctttgtgttagctgactttccacagccttagaaatacatcttgtgactgag
ggggagaggatccatattttacatatttaataggtgcacctgctcacattccttctactt
tgcagttgtcatcttgagactgtagagataaaaatgcctacaaggcacaaatgaacagtt
tggtgttgaccgaactgcaaaggtagtgacagttccctgagcacatagttccagcctcat
ctcgattgtcttttcctccttggagaactgctgatgagctaggaagggtgtttgctttcc
ctactgaatgttagattgtttaagtagaggggctgatgcggggtcttctctgggggtgct
ctgctgactatcttgcttcctagctgtgtggggaggggaggagtgaggctgacagaaaga
gtctccaaacccttgcatatctgctatttatgagctttaagacactgcttttcatatctc
ttctcaaaagttcaatgttacactgattcttgcttgcagggacccagggTAGAAACAATG
ACCCATTGCTG
Primer
(+)cctttagaactcggtgctcagt
(+)cagcaatgggtcattgtttcta


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