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Human element [ hs1820 ]


Position: chr5:54,237,176-54,239,729 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC102467080 - ESM1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGGCTGCATAAATGGGTAGAtttttaagaactgcctagaactcaaaaatgaggcttccag
agttttatcccaccacctcaaaaaaaagcagatttcaggtaagaattctggttaactttc
cctgctaccctctgtttcccttctccaaaccccccaccccaaccccattcccaataaaat
gcagctacctaacaaaggccataatgctttctatagtaagtaaattctggggaaaattag
aaatatggttttccaatttttgtcaaaaaaaatcatttataattttttaaagaggggaaa
aggccttaaatatgttgaagcactgccactcatttcttttcttagttgggacatgcatat
acccgtaggcacacattcacaaggctgacattgccctctaattggaaatcctcttaaaga
aggaaagagaaacttgttgatctccctttcattatccttgggaataaaatcctgcaaaca
gacaggtgtcatgatgcagaaaccttttcagaaattccccaggatgaatatcccattttc
tctaccatttctttctttttttttttttttttttttttgagatggagttttactcttgtt
gcccaggctggagtgcagtggcgtgatcttggctcactgcaacctttgcctcctgggttc
aagcgattctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccacac
ctggctaatttttgtatttttttagtggagacaggtttcactatgttggccaggctggtc
ttgaactcctgacctcagatgatccgcccgcctcagcctgccaaagtgctgggattggag
gcgtgagccagagcacccggtccttcctctaccatttctaatcaccctatggatggggga
ttctcttcctcctaaggtcccacctcctgctgcttgcaattgcaaaggagatactttgat
agattacaaattgttttcagtagctgacctagacataacatcaccacttcctgattatat
tgatatgtgtttctattatttgcttatttgcgcctccagaaacaattcttttttgttgtt
ttactataaacagcattgcaaggtctctgtattaaatcataattatttacccatgcagtt
catgcacctttgtccctggggaatctggtgacgtgaatttacaggaacgtcagggtattt
ctcaccaacagtttcctgttattgatatgcttttgtttagttgtgatcttttttttaagc
attcagtttctcaagggaaaaataaacaggcatgtgacaattatcacagtcatgggatct
catctggggacctcacgtatgtgttttcatcagggactggcccctctggcaaggccaaac
actgtgaaattgtataagcagacaattggttatcattcattcgttctctcagttttccca
catgcttcagatagctatcttagtaaataaatacacattatactttgtagaagaaattcc
acagtctcaaaagagactgtagtaaaatagaaaaaaaattataagagatggatcgataag
aaatcattgatttttctaagctctgaagtacagaaatccaaggttggacttttcaattat
gaagtaattatgttagttaacactgtcatgagcctaagtgttcttgccaactaacgtaga
aaattgtagtacttaattactgaattgagacttcacaacacttggaaagatattaaatgt
acctaagttttccgtctctctttattattactcaaatatacattcatcatgattttcaat
gtctacttttaattgagaaatgagaatccttatcctcaaaaacattccagaaagtgtagt
ggtttttctaaatcctgtcttctatatcaatatgctataaaacgtgagctgaaaactgac
attagcaaacaactttctaaaactatgctgtcctgggtggtagccaccagccacatgtgg
ctatttaaattcaaattaatttgattaatttgctagaggccatgatatgggacagcacag
atcactgaacatcttcatcattacacaaagttctattgggcagccctgttctaagaagca
gactcaacatgcaataagtagaaagctaataccttttgaagtacatttactggcggaaat
tgcagctaaacttttcttatgtttgaaaattgtttactttcaataaggtggcccccttaa
acctaacacctcctctcctcaggttttattcccttcagaagtgtataaagtatgtagagc
tggtaagcctggaaaatgaatcaagaatataaaaaggtattgtgaagcaacagtatatcc
tgcaggaatagtgctcatcgtggctgactgacaatttgcctgatgcaaattgtcaaatgt
atttgtcataatgtcattcttcctccctcctttaaaatgtcaaacaagcacaggtttagg
tgaatattatagcatgtaaatatagaagtcagttgtctgaaaattccctttatgatatgt
ttacccttggCATCAAACCCCGTCCTTCTAcagt
Primer
(+)tggctgcataaatgggtaga
(+)cacctagaaggacggggtttgatg


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