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Human element [ hs1813 ]


Position: chr5:155,837,679-155,839,485 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: SGCD(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTTAACCCAGCGAATGAACCtgtgaaacctttgatggacagtcaagctcccccatggttt
agcctttatctctgcttccagctgcccttgctgtcttccttgctagtatcccttacatga
gctattagacccatgaaaggggcctcatttttctgtctctgtcctgctgtttttcccact
cctcttttctggaatcctaatcctcccttcttcttctccctggacaagatcaactctcac
ttcatgaaatgaaaaaaaaacatacaaaggatttaagattgttactggtctagaccttat
tatactagtctgtaattgggagtctttcacatttattgtataaatgcacgactttagcaa
attatgctacagtctttggtattattttaaaatcatattgcttttatatgatttgccccc
ttgatgttttatttctttgatgccatgtgttgagcagttacacagtaaaaactcagtaaa
ctcttattggtgatttttgaggttgattttcatggaattcatagctcgtgaaccatctga
tccttaggtcgcaccatttatttcttggcctctgcacagaacctttttcttcaagatgtt
ccatctgctttgcagaaattagctcatgagtcatttcctttccccaccctccttgtaaac
tgtagcagcagaagggcagcccctttggaataagtggaagtacaggggtcgcatggagca
gtagggagttcgaagcaggctcaaatctgtcaagtcctagttcagggttattatccccca
aagcactgagaaattaggcagagacagctctgttcagtggaaagaaagtgctttggagcc
agacgtgactgggctcagatcctggctctgcctgttgtatgctttgcgatctttggcaac
acagttaacatctctgggtccttgtttcctgttccataaagtgggaatagtaatatctgc
ctgccagggctattgtacaataagataaacagtatgaaaagacactagcatggtacctgg
cacagagtattaatttcatagtattattcttctgacccagagaggtttcagtgtccccca
aagagaacactgcagaaattattgacacatacaccaaaaactttgtaaataacttctcag
ccacattcgggcctgttgtaaaatcatgtttaaaagttaattattttgtccttcttgctt
aacagggtggaaacttgataaaatacacctgtgagttagggtttttgttatttcctacct
gacagccagaaagaaaagtctgaaaattacttttttctctttactttgaattttcaagag
ctgatcaatttttatgttccctaaagaggagaattcaataaggcagtctggaatccaact
aataatttttagtcgtgcattctagggtggaccttgatagaatgtttgttccatctttgt
gttttatgttcactcttttaaactgggtaactgaatgttgaaatgttagcctgggtaagg
gtcagagtagcacctgcttggccacatcctacctgggtgagacacagcattgctgtagcc
ttgagtttcctcatcattcccattcaggctggttagcgtgagcctcagttgaccaaactt
tcaagaatttcaaagtgtaaaattagaccaggtatataaaagttctttaaaaagctgcag
ttgtatttgaatacaatcaaatggcttttttctacctatgtttataaattggaaaataac
atagtaatagaaatagcaatggagggtagctattttttgagaaTATTCTTTGTGCCCCAG
GACcaaa
Primer
(+)tttaacccagcgaatgaacc
(+)caccgtcctggggcacaaagaata


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