Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs180 ]


Position: chr5:3,226,121-3,227,484 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC102467074 - LINC01019

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TAGAGCCCGATGGATTATGGccctctcagcctgcaatgccataatactttatttcaacat
gatatgacatcattaaagacactttatgttgtttttgtctgtggtttggaattatgtctg
cttaatcaattccattatgcattcaacttccatgacacgtcaaaggctgataaggttttt
attttttttaaactttgcttgcttaaaatgatttccctccagatcaagatgcagagcaca
aaatattaatcagtttaaataaatatcaagactacccaaataatatgaataattggcacg
ggatcgtgcctactgcccagttcccagcagctggtcacgctggcacgaggctcctctcaa
cagtctctgagataatgactttggcatctgctgacgagtgcttgtgactgcccacagaat
ttacaactcacaagtggaaaacagaggctccgacagaactgttttatgcaaggtctttga
aatttattaatgtaatgcaaacacgagccttccaacccattaaattgttgatgttatgcg
agcccactctggaattgcagatcctcattagcattatttgcatgttaatctgcatctttt
taattagtgatattatttatgcacataattttcgcctactggtgccaaggctgaagcgca
ttaattaatctactgagatgccaaactgtttattttcccccgtacttttatttgtttaca
tggtgttttggattcagggaaaataaaaaagagcctgaagaataaaagctgaaagacaag
attaactaaaagctctttttgttttcataatttaaattgtaatattagccaaatgttgtg
tttcttcccttagagatcggttattcagttacattaccttgatgtattattaaaatgtat
aatggactctggaggcttctgttagttctctccttcatttacagaatctactcaatgtta
ttttaatcttcctacaacgctcccatgcataggcaatgatgagccatccccagtgaatcc
cctgcacggctccactttgcacaactgataaacatttaaataagccttttcaaaaaagaa
tagcacgtaaaattattaacccattgatggagttagctaccgctcagtaattcatctttc
ctcaaaacaggtcaatcgcaaaatgcatttgacttggcgacattgaggcattctcattcc
tgcaaccgtggttaccaggcattatccagaaccgtgtgtccatttgagtacacgcacgcc
acacgaattttttaaatgtataattaaaagtgtcccgcactatctatgctaagtacatac
aatttgagagccaggaaaaggcctAGAGATTGTATGCCATGGGG
Primer
(+)TAGAGCCCGATGGATTATGG
(+)CCCCATGGCATACAATCTCT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.