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Human element [ hs1794 ]


Position: chr9:126,595,592-126,598,852 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MIR7150 - LHX2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGCATTTTCCTGTTTGTTCCTgtttttcatgttataaaaaagtttttctaaacataaaaa
caaaaacaaatagctggaaaaaaaatcagaattttacactttttggcagacaattttttt
ctccacaaattccttaggggggagaaatgtgaaatttcctataatgatcaagtgagaacc
ctgccaattcctaattcccaagacctactctgagcttttttaggcataatacatgaattt
cagaaatggttagtaaaaaaaagtcatcatgagcttcactagcagtaaatagtcctgaat
gtgcctccatgtttgatgtaattatttaactgggaaaaagaaatagcctatatatttttc
tgcacctaagctttctagtaagcaaatgagagatattcacctttcagactttagaaagat
cttttgtattgataactcacatcaatgggtcttaaaaccagcttcaggccgggcacagag
gctcatgactgtaatcccagcactttgggaggccaacatgggcagatcacaaggtcaaga
gatcgagaccatcctggccaacacggtgaaaccccctctctaaaaatacaaaaattagct
gggcatggtggcacatgcttgtagtcccagctactcgggaggctgaggcaggagaattgc
ttgaacctgggaggcgggggttgcaggaagctgagatcacgccgctgcactccagcctgg
cgaaagagcaagactctgtctcaaaaaaaacaggctcaaatagaatacagttgtctattt
tttattatcactactgttaaatgaacaaatgcttgatttttaaatccttgatacaaattg
agacatttgatacctttgccaaaagaaaatagataaaaggaatctacctcctccacaatt
cagcaagcaccaaaagaagttaatttattcaacacataagggtcacaacagaatcataaa
agcagtcatcatttactgagctttactgtgttctggacacttgctaagtatataagaaac
tcacttcatcctcacaacaatactatgaggaggaataaattatcttcccccattttacag
ataaggaaattgaggcttagagacatcaaataatttgcacaattaacaaagcaagtagca
gagggagctttcaatcagttcattggtttggtgtgaaatacctgatttctattttctact
ttgtgtctttattttaaaattttaagcctaaggactatgaaatgcagagaacacgtatat
atatgcttacatagatacacatgcatacgggttttaaaggccccaaactactcacacgtc
ataagccctgtatatagctctgcaccagaacagagcttaggttttctccaagaaacaaaa
cggacttctcaatgatagacgagcaagccaaagcaccgcatatagtaagtctacaaagca
ttaactggattaattagcaagggatttgagaagcagcttggagctaggaaaccaaaacac
taaattgtttaaatactttggcaaaagatcaaggtttctaggcagcactgggtctccttc
catccttttcgttccatgttttaacacatttaacctgtctgaggtagtttttcatgagat
atgaatgacattgtcaaaataccaaaaagaaaagagaatttaaaaaatactgcaagctgt
taccaattctgccaacaggcaagagcccaggcaacattaattacaaatcaatcgctcagg
acataaacagctcttatcactggtaaactctccctctaaaataacttgctttagagggga
aaaaaaaaaaaaaaagcaaatgtctcttctattatactcggtgaactaatcaggacaatg
aaaccaaataaaacaggagaaaatgcaccaaatagcaaacgtgaaaaaggaatcctagct
agatgaacgcctggaatgctaccagaatagcactgtcatttagaaataacgaagaggaag
tggtcagggtagggacactagctgaatgggtttctggtttccaggaagtaagaattttta
caacgcagctgattttcacaaacacatatggcagcaaaatgataaaaggcggctttcaac
aatacaatcatggtagaggtggggggaatctgtgtccctctagtaatgaaggtagtttta
taatggtcaagcacactcatcacagccctcaccactgccacacacacaactatccaatca
taataatacatttcaaaaatcaaaggatccttccagaagtctagttcatctagaccctat
ccacaaactactattcgtttacctaactctttatcttggatatctgcattttcctcttga
tttccaggaaaaaaaaaaaaaaaagaaaaaacctgagtacctttctactgcaaaaactct
caaaacacactcctccaccacacacttcgttcactccgatagaaaaaaattagtagaaaa
gaatcactaactttccatcaaaatacattctgacttctgttaggtcctttgggcttcctg
aggatatggtaaaaagtggtatatggtatatatgctatataaaagtggggagagcttcag
ctatgaagcctggcaaaagtgagatggttaggggttgttttctcaacctccctcaataaa
atgaggaagaagggctatctcagaatttgagaatgagagatctgtgtgtaaagtatccag
cagggtgtctgacacacagtaggtgtttggcagttactattattatttctccttggttcc
ggggacatggtatgttaagtttcaggataacataaattctttcctgaaccagaaatttta
ttgacaattagataaacaagctgttagcagattacagtagggtgctatctgttgattttg
aacaaaatttacctcagtatgtccagggcactgtctccaaaggtttcacgacactctcac
attaattgtgcactttcataaaataactatgaggaaaggctaatgggcaataatacccct
gggctcacatatgaattaacaagactgaaggaaatcagggagttcacagtgcagccaagc
tcacacaaatttcttgactatgggtattttattcaccagacttggcttaatatgagagaa
aaagtaacacaagttcatttcttcagtcaaattatagaggggaaaaatacggttaagaag
aaaaaagctaatatacttttttacaaaaataaaaaggatatataataaaataccaaaaGA
AAGGTAGCCAAAAAGGTGGTt
Primer
(+)tgcattttcctgtttgttcct
(+)caccacctttttggctacctttc


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