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Human element [ hs1791 ]


Position: chr14:57,474,144-57,478,090 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: OTX2-AS1 - EXOC5

Timepoints:
e11.5

Expression Pattern
midbrain (mesencephalon) (15 out of 15 embryos) 

Embryo 1

Embryo 2

Embryo 3

Embryo 4

Embryo 5

Embryo 6

Embryo 8

Embryo 11

Embryo 12

Fasta sequence
TGGAACCGAGTTTGCATTACtcttgttaatagttaaaacatgtttttttaaaaaaattag
tgtctcaaagacaagctaagagtgtccttaagaaatatgatatgaaactgaaccagaatt
aaggctaggattctgtgatttatttgggggctggggggacagtggcacagggtgatgcca
tccacagaagagtgaaaaaaaaatgaagataagtaataactactgtaataaagaatctct
aagcacacaaaccaacatagcaatgcctcctctgttaaacaaaaacatcatctaccttga
gaaatttaaactgagatgtatgcagataagcacttttacttttagtgaatattctgttaa
ttcttaaaaatacacttttgcataaaaggttctttttctcccttcactctcaatgtgctt
ctccaaaagcctgcatatctggaaatgtaaatagatatccatccagttaaatatgaatta
attagacaaatctgcttttacctacatgctgtgtgtaaaacagcttaaacgtacaacgaa
gagaagagaagagaacagaagtgaagaagaaaagaggatttaaaagggaagcaatccaag
acttccattttcttacttcagataaacatatttaacacccacaaattatacaggaagttt
cagacagctttaagtgagccccacagaattatttactaacagacccaaaatgtacatttt
actgcctttaacttcccgattatatttttaattactgtcaaagtaccttctgcagactac
aatatcatcgtgtgaaaaccacacatttccttttagttccccctgctcagaaaagttcta
cattcatttaatcctgaatctgatttcatcggtctaaaattttgagtgtgttcaactaca
gagtgttttccttttagaaaacctgagacaataaccagaattcatagcaagttttcccat
tcaaccagacatttcttgagggaattgcaaaagctctgcgaagaaacagttaatatgtat
atatctctctgaaattggcaaatgtcttttatttcctctaatattctagccagagatctg
agctcattttttcctgtccataggctcaaaaaaaaaaaaaaaaaaaaaggactgtattcg
ctaattatacatcctgaaaagaatttggttcagtgtaagatgatcctagtgatatgctaa
tccctttttctgcttggtgctgcctgaagcttgtgtctaacatttttttcaactgtatga
caataaaagttctggcaacaaaagaaataaatgggcagctaaagaaggtatagctaaaca
catggcaggccgtctctccctctccttctggctgctcttttgtagcctccagtttggtat
cctcaagtcaatagccgaaatccagccaccttagcaacttagtatgacacccaagccctc
tctctttacattcatgaatagtcagcacccagcagacaaaatagaactaatcttttttga
cagaattgttcaattttagaggaaaagcttttgagtcttccacacatttgcagaatatga
gacaacaatggctgcaatcaaattttaaaaacaacagtggccaacagggctggaaaaaag
tctctttgaattaaatagcacattcagtcagtcccagtggtcataaacttggggcaaaca
ttcatttcaatacgtgaaagaaagagataaacaaatgaagagtatatccaacggtcccat
tctgagcttcatgcagtaattccttctgctgtgatacatgcgtatatattttttctattt
tctttccttttcttttttcatagactaatacaaatatctttcctctcgaaaataattttg
tttgggggggtgcccaacaagtctcagtttaaaatgctttttattcagcaaccttttgta
gtcatttgaaagcaattttaccatatagaaatcctctaatgtatcagtcactcgcaagtc
taacatgtgttaaaaatgaatcttctctccattccaaccccctctatttaatacaaggca
tctctatacctttggagacaatatgaacaagaagaaaattctacccagttcatggcaaaa
acagaagttagcaacatggtccatgcagctgcaacattgcatttaaaattcagtttcctc
ataggaagagggctaatcctgcccccgtaattccctacagccaaaatgtgccccctcccc
gcgtgacagtgcaatgcaaagacactagcatgcttatcttgcctaaccagatggccgact
tggatcaatgcacacacaccacgatcaatgggagagataaagaattaggaaaacagtggt
acatgctcccagaaagcttgtacactgcataattattttatgattctacacatggctaca
tgtgatactgaagtagagaaggaaaggataattagagtgccaggaagaattttgtagtag
actacactttgtctgtcagcacttcccactctagcaaactcactgcccttatctgaaagt
gaatttagaaaaacatgagcgaaaatgtcagggaaggtatttccatttttgccaggtcct
gtcacgtcccaaagtttagttcaaagcctgaggaggcttcctgggatttggatatgcctc
tcatcattagccacccctagctgcccagccaaggaaacccacagataatagttgaatgtg
atgcagactgtaaccaggaagaatttggtctccaagtgattcaggcaagttcattcagta
aaatagagcaggacgaggcagtcccttaatttctgtttcctgattggctaaccaaagcaa
tgtttttcagcaggttggttacgcacttgagactaagaaaaaaataggaacccacatccc
tgtcactcagccaggtaataaggaaagtatatgaggctctgaagctggcacattgctact
ttatcctgaattcagaccaagatcataaaccagaacaataaaccactgtaattccccact
atggtcatgtattaatcagaaaaaaaacaaaatgttccttcagctcttagtacatggtgg
gtacttattaaatgattatattattattgtaaatatgaataatcctttaccctgtactat
tccaacgtgttactctcttttcaccttgcattagatgcaactaaaaatagtgttagattt
tcctttggatttgagactcagcttgcatgctaattaaaacattcaatgaactttttacac
catttttttttttatgtaaagagagacaggaactgaaatctggaattagacacagctctc
caccactgtcaacctcaaaaatcctgtgggtaagctagtcattctaagtagcctattaca
tttgaaatagagcaaatattcaatatccaaataattaaaatcactataaattatttccta
aggataaataaaatataggttgggtaaaaattcaaagggaaaaatattgacaattgtgaa
aagccatagccaccctctttgtaagttattttagttgggataaatattatgctctaaatt
ttcatatgactcccttgttctctgtggagttgttttgttacattatccctggcctataac
atttctctcctcaatgttggtacaaaacggatagctatatataagtagcacttagctttg
ctgcccattatcagatttggagaaagagcctgggttaggaatatgatgcatattaccata
tctattttcagttcaaaaccctttaaaggcagggccatcattttaccttttagggcttat
ttttcttttctctgagactaaaaaaggtaagtgtaaacatgcagtatgacagactcattg
aggctcttgctgtaaaaattgattctgcatgtactatattttataccatgtagttgagct
tgcaagatggagggaaacttttggATGTTGGGGTAAAGGGGAAGtTc
Primer
(+)tggaaccgagtttgcattac
(+)caccttcccctttaccccaacat


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