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Human element [ hs1781 ]


Position: chr20:39,235,779-39,237,626 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC100505663 - MAFB

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ATTATCTTTCGGGGGCATTTtcagcctactacaccatctaaataagctgatactacatct
tggtggcaccaaggagccattggaaggtctctggtggcagagtgccatgatgagatctat
ttcctgaaataaatgtggactctctcatggcctgtggcaaatccactccctgctcgaggt
ttctgaaaagtcccagaggctttcactattttgtcactcctagctccctttctttccctc
ttacctatgatctcctgcacttctgctcaaatgcagaattaaaatattcttccttgatct
ttaccccctccccccaaaaaaattcactcacacaagacatttttgtgtgtcgatgacttt
actaaaggtttgtaatgtcagactgagttgacatcatagaatgcaaacaattttaaatta
agcattaaatatctcattttgatgcatccttgacccaccctggctaccttctttctagac
tttccccttctaccatgttcccagactgcttattttcattctttttttattattttcctt
ttctctgctctaccccatccggaaattcctgcaatttctcagactgagcagttaagatat
gtcttaccctctccaggtgataaatgttaatttctggcctctaaagctgagagaggtgtt
aatttcctaagcaagggtaacttcctccccaagaggatccctaatactgcagttgaaatc
agaattttttcatcctattgcacttatacatagaagtatattatatgttaaatacattta
aagggacatcgcacatgtaaatacccacacactctcatacacacacatgccccaaagatc
acagctaagtcccaacttgaagtaagcatgttcgaatgtcatcgccatgacccacccacc
catctgttttgagctgtggttggcagcaaataattagcattcaccaggatggccaagccc
agcttccactgtggatcccaacagcctgcctcacagcaagagactccgctttggtgtaat
tacctattccttgcacaccagttgccctggtgtgatgtcagcccctccacattgtttatt
ttaattaaaacagaaattgcaggtcttaggtgcttgtaattacagcccatgaactaaatt
gactgaggcccctaattaacctgaaacacgtctacctggctggaggtgtgagtttggact
tgactagttcagggcactgcatcggcaccaaaaacagagcaaggaaaggtctattaggga
ttcagatagggcatttgccctccaaaaactgctacacacagcctgtacccctcagaccac
attgtgggttcaatttcaattccaaatgtacctaattagcccaggacacactcagcaaaa
gtgtagtgatagcatctaaaaatcaactaatgtaatcatcaatagaatagaaagcaaaaa
caaaggagtaaaaaaataaaaataaaaaatcacatgatcattccaatagatgcagaaaaa
aacttttgacaaaatccaacactctttttttaataaaaacactcaacaaactagggatag
aagagaacttcctcaacctgataaagagcatctatgagaaacccatagctacgtcatact
cagtggtgagaaactttctccctaaggagatgctttctccctaagatcaggaacatgaca
aggatgtctgcccttaacacttcaattcagcattgttctggaggttctgtcgcaggcaat
tgaaaaagaaaaagaaatacagacattcagcttggaaagaaagaagtaaaactatctcta
tttttatgtgacatgatctcatatatatAAAATCCGAAGGAATCCACT
Primer
(+)ATTATCTTTCGGGGGCATTT
(+)AGTGGATTCCTTCGGATTTT


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