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Mouse element [ mm1776 ]


Position: chr12:105,712,807-105,717,167 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gsc - Dicer1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGGCAGAACGAAAACAGAGGcccaaagtcgtgcgtcccggtgccagcccgggaattgcac
cgccatcgcgcaggccactctccagctactccaggagagacctgggtagaggacttccat
accatttgtggagattcctctctcactgataagtctgagataacttcaacgctgtctaaa
gccgtacaataaatgctaagtcctccctggcactggaggagatcctgggacctctcctta
ttgctcttcctgggttagagaatcattgcggtaagtttggtcccgcctgggcgcagaact
aggcagtgcgtgggagcagccacccggaacttaggaaagcgtgtacctccgtgccctcca
gcccacccacgcatggcctaggacacttgatttgcttacgttgcaaattgggggtggtgg
taaggattggatagagaccggcttcagttggggaggtgacagtttcttgtttttgtttta
agagaaacaaagtcttctcgggaacgcttcagaaaggccaagcccacctagagaagtgac
ctttttccattacaatgactttactgtcaccaggttccaggacacacctgctgccctcca
acattttcccacgttcggttctaaagggagataaattgattgacaagaactggaggctgc
agtgacttcgctgtgttcgtttgtgttggtggttgtgagtggataaggcgcatgcagggg
caggtctcttatatgacctttacaggggtacaggcagaaacaggagagcctggggtagat
tcctgaacccctgaaacttctgaaaggggactcagatccagacccgacaggtactcagcc
tcagatttgaaagagcagtggaattttgaaaagaataaaacaaacccacgcccacccatt
catgtctctttcagcttggtacttagtgatcagttttaacaagtccgggatttcgctgca
gggctcgatttcccgaagccctgtagctatatcagtgaccctagaaggaagaggctgttc
acctgtagtcaagggtgccagggttcaagacctaacattgccacctggcaaactacccct
cctttggaggcctcaggattttaaataatctaaccaaatccgagattaattgaatccctt
aaaaccttagtatttaatgagtttttttcttttcttttcactgggacaaaggagtgtgtt
ggccccacccctgcccaaaggcaaaagcagggtctcttcagctgggttcaagataaagaa
aaatcacttggctcttttccttgaaaacaagactttcccagaaagaagctcccggaccca
agcctcacaactacatgggtttaaccgctacactccgggagagctcacccgtggcgtggc
tgagccttcctggtacaattgtcccctcagcccaaggttgttctactttgtcggctggga
ggcggactccgtgaaggaagtcaggggcccagctccctcgctgtgctttctctgaggaaa
ccctacaagtgtccccaacgcactaggaacaatccagaatggccgggcgcaattgaaata
acaaatgcgaggcacgcaaattgtccccctccagttgctaagcgattgtttgtcgccccg
catgcccagctcagcatgggagaaccagcgagtccggaggcagccagcgaggcttcggtg
agaaataagtaaacacgcagttgattttctctattatcacacaaacacgatttcacacaa
agcaatcaccacgcagaagtctatgaaaatgtgtttgttgggggactcacttgtcccagt
aatagccctcatttttaagctattaaagaccagatcagtggattccacgtgcataaggta
tatctgctgtttggggtcttttgaagactctggtaccatcatcatctccgaattgattcg
gagtgttgaattcaattgcttttctaatttaaaacctagagcccaagtttggagtgctca
tctggctatctttcagagggctgtctccccattatccttatatcccagcctcatcgcttt
tctcttcccttggggatgggggtggggtgggggcgggggacgggtcagaggccccaactc
ctcagggtttatttcttaaacactcaatttctggcctgtacatggagcaatttctaatta
gacattttaggtagggtttttaggtacgtggtttaggtaggagttttttgagctatgtgc
aaaaaaaaaaaaaaaaaaaaaaaaagctgatgcgtccttttcagaagtatgtgagatact
gtaagagagacataggaattaggaaaaatagacgaaccctcacgggaaccagagcgtact
gagacctcctacggttttaaccaagcaaattggttttgctgtttgcattttggctttttt
ttttttccagtgtctcaaaaacagtttcctgtttctgctgctccttggaggatgtctcag
gagctccgagtgatcttcctccgggagtttggaactgtgccgctgagcagagagctcaga
accaccttaatgtagggcacagccagcagaatgtggggactgcggcttccgatccttgga
cattagctagctgattctttgttagaaattttgcaagttcgaaataaaataacactaatc
aaagtgttaggaaagtgccccagaatcctgggagggaaaaggatgtccccctaaatgacg
cgtttcccagggcctcgggaagagaaaataacttgggcttcccggtttgcagagagcagc
tgagttatttacccaaagctcgtttcaaagtgactccgcagcaccgaggcttttgtaaat
cacagaatgcaaatgaggataatttgttcttaaaggaactttctcttgaaatgattagca
aagtcagtcatttgaaaaaaaaaaaaaaagcggccagcacagaccttcccgaagccccta
gctaacccatatcagcttctaacgttttcattcatgtaaacctcattaatgaagatcttt
tatttaaacgtcaaggggatttgaaatttagagtaaattatgaagcttgtatgtctagcc
aagtcatgggtcagatgcgtttgtgaaaaactgctaaaagagcatatggttttgaattct
tctacaatgactagtgtttaaataaattgcttgtactgcttaacttcatgtgtaattttg
acagaaattggcctatagccttttgatatgtaaacatttcagccttttatgcggtataaa
aaagacacttgctttttaggatcagccccgtcagtcaccctgtaattcagaaagctggca
cctaccattacgtccttgctggatttcaacttccaactggcagtgttggggagggaaaaa
atatatatatgaaagaaaagaaaaaaagatatttcaaaagcaatgtccatttgcgattaa
aagctgcagatgaggtgagaacgggccacttactatctgaaagacatggataaaccatag
ttattaaagaacatttctgtcagtcttctttaagccggcccaccggaggggacacttaag
tagggctcaggaatgactgctgtgttattaaatgcttgtcttaggacagagccagtcagt
ccaacatacaaataggtgttaaaaaatctaggtatcatttcaggaccttaccaactaaat
ggctctaatgtcacagaacctattaaaatgcagaaatcagtccaaggcgcaccaaatctc
aggatacagatgacaaatctgaggtctttcttggatggaggctcttagcggaagaggctt
caggaggcttcaaagtccccctggggtacaatgcagagctctttctgtgcctgctgaggg
ttcttgaagccacaggtctgcataaacccagtcgctactaatgtatctctccctcaattt
ggaatggatttctctagagccaggaagggaaagacagaacaccctggagaacctgagtgg
ggacttaaggctgacttacttccggagtgggctctgctcttggtctcgcttgcggatcgt
cctgtatgctttctgggcgacactgccctttggtagaattttggaagaaccagggaagca
aagttcagagacagggaagagcagcctctttgtacattgtgggttgcccgaggaagctga
cacccccccccccaaaaaaaagaccttgctggcacgaatctaattaagaaaaactgcttg
gctggggaagacagggggcggttcctttaccgttgttctgcattgcattccaatccagca
acccggaaagcaaaggacacattttaggacataaaaagaagttcaaggctgtttttgttc
tgttttgttttctaagcattcTGCACTCCCCTCTGTCTAAC
Primer
(+)GGGCAGAACGAAAACAGAGG
(+)GTTAGACAGAGGGGAGTGCA


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