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Mouse element [ mm1755 ]


Position: chr9:111,664,243-111,666,468 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Stac - Arpp21

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTGTCATAAAGGGGCCCCATgtaaatgtgtgtggtatatataggtattcttatggatgtg
ctcatatgtgcatactgtgtatgtgtacatgtgtgtggacacatgtggaggtcaaagagt
gacatcgagtgccttgattattttacacacacacacacacacacacacacacacacacac
acacacacattcagggtttctcattgagcacagagctcatcagttaggctcgctgactag
tcaatgagctctgggttctgtctctgtctgtctctgtctttgctccttgcccccatacag
agattataaatataagctttactcctgactttgtatgtgggcttctatgttcagattaag
gttcagatggagatatgaactcaagtccccttgcttgcttagagagccctttatcaatgg
tctctccatctctcctgtggttttaaaagttgagatatactctgtgagttacatgcatgt
tgcacggagatgggagctcctgccatgtgctctcatcattggtcatagccctgaggcttt
ggtgtttctctgtcttcaaggagagaggctgggttgcttcgtccattagggccacagcag
gtctctgcatctgcggttttaaaactcattaaagtcccgcaacacaaatgcttagctcct
tgttccttaattgccaatctcagcctctttactgccgcttacctggagcctcacatttca
tttcccaaatagccctcaaggtcacctatttcccaaacatggggacaaccccaagtgaga
agcaatagcatgcagagaagaaaagcaaaggcaatctgcatacctacttgttccatctag
ccttaaaaactcaatgtgcctaacaatgcttgttacaggaggatttagggaaactggcta
gtgccatcctaaacacatgaaagcaacagctttggagctgacccctgtgtacaatcacat
gtcagcgtctgggtatgtctgtgggtatgtttgcattcctgttatttgttcgcatgggtc
tgtatgttcataaaatcagactgaggcaggagagactgatagttgtgacttagggagctg
aggggaggtaggatctcctctgcttctggggcctgacctgtgttcgctgctaggaaaggc
agacttcagactccacctataaagacctaagggctaacagagagaatgtgtgttttctaa
aaaggctttttgtcaaaggcaataaataaattgctctcacttagggctggatgacgcatt
tccagaaagagctcaactagggacttcattaggcaatgctttcttaggctaaggcgctgg
aataactttgtcctcctgctccctcactcagaaggctcgatgatgtcatccttgtaatgc
aactcacaaccgtgtttaatgagaagctttctttagcttttaatcctgccacaaattata
ggccttcggcaatgctagaaagaagaattacagtttgctagagatctttagtgcccccaa
gatcccatatacactgacttcgaagaaccctttttgtgacctctggtatggaagctcggg
ttgtcctatcagaatgctttactctggccccgcccacaccaatgcttcattccttctatt
tttataaactgcttcatatttgaatggctctgaagtttgtttctttgtcaaagtcctgaa
tcctcagcagattcttctgaaaagaaatccccaggcagcaggggctagtgaggggaggag
agagagcagcgctccttttttggctggtaacaaaataccgtagcaggtatccacacctgg
gagagagtgaagaggaaatggactcacggaggaattcatgctgattggtaatttagattc
tgtgtctgcgcccctctggtaatttatttaacctgtgatgcaaaacagagcagaaacaag
ggagatttacgctcagtgaacattgacaggggatattattaaactgttcagtatgaaact
ggtgcaatggaaaatcgtgaatttttaaaatatccggtgagctgatgtgaaagttagcac
ccaaaatgtaaaatttatatccacagagctgaccagtgagtgggttgtgcatggaaaata
tttgaaacaaactctgtccccacatttgaatttctggttacctgtttagtttggttctgg
gatttccagctacagccagtctcttgcggttatcctcaagtagtgagcTCTCTGGCCCAG
GACTGG
Primer
(+)ttgtcataaaggggccccat
(+)ccagtcctgggccagaga


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