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Mouse element [ mm1744 ]


Position: chr1:91,262,782-91,264,282 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: C030007H22Rik(intragenic)

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGGGGAACTCTAGGTCCCACaatgttggaggaacagcatggccccctctgtataaactca
ggggactatacagcatggatggagacctacctacagaatgagccaggacaggaagttagg
gacagaaggaatcatctcagcgggaaacctgcagaagagggcgcaagcccacagtgtttc
cttccagatgcagctccttctccaggctcagctcgcctccctgctgagctgggctgaacc
acagagagactacaagaccatgtgttgcttgtttccctccccatccctccagacaccccc
cccccagggggagctgcttggaaatctccgggctgggacccacatctggaaagtcagcta
gctccttttggaaagcattggcacactctgttttagataagctcgaagatggaagatggt
ttgtgtttgcccagtagggctcatctctctctccttcagggcaccactctgttagtggtg
gcaccccataagctagacaaggtcactggcagagagaaggggaccagtttccttttgctt
tttcaaccactaccaagtctttctttctcatacacctatttgctgagaccctcccagagg
ggtctttgcaggagggcaggggacagtggcagtggccttctactgattactctctcagag
gtgacaggaaagtttcaacaggtaacaagatggccatacacacagggtgacatgtggcag
gagcttcatgctccaacatagaaacccatagaaagcccacaagaaaggctgaacacagct
ggcctgtgagagacttggaatctggatgtgtgaagcccactgcagctgggcccctgagct
ggtttggaaatatgactggtatttcctccttgtgttcaaggaagctggaattttactcca
acttttatggaggtgctgagccatccctgcccccacatgtaagcgctatcccccatcatc
ggagccgtgctccatactgcacacccttatacttcatgcacacgcgtactcagcagactc
ataccacacacacttacacacaaacttacagctgtataagctcacttgtactcccccact
ttcaccagaaatacacacggggaggggggataagagaggggaaagggaaggagggaggga
aggagagagggagggagagagggagagagggagggagagagagagagagagcgagcgagc
tgtgaaacaccaaggaagaagagtcaagtcaaagctaccctgtgtcagcagagatgccat
tcagctggtctcagcactgtcaacacagacttcctggctacctgggactgtgcagggaca
gcactcattgttgacctgtaacagcttgtacagccttctcagtagttactgaagaccact
tgacagtctagttcccatcaggctgtttggtgcagctattgggggtagggtctaggaggt
agttttcctgtgtgatatggattgtacgttgatgtcgattaTGGGGTGGGTGGTGTATTT
G
Primer
(+)aggggaactctaggtcccac
(+)caaatacaccacccacccca


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.