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Human element [ hs1744 ]


Position: chr9:8,736,481-8,738,586 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: PTPRD - PTPRD-AS2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
gAtaTCCAGCAATAACCTAATCCACTaaaataacttgtactttaaaaagaattataatgc
agataccatagtatgtcatttctgaaactcagcttaagcatgagaacaaaaattgtttta
aagatattaccttttttattagtattcataagcggtttgaatgcaggaaagataaaacta
aaaaggagaggaatcactctaccattctattagatagtctcctttttttttttttaaaca
gtgggttggcatgaagaagcaagtggtacagtggaaaacttcttgaatccagaagctggc
cagctgttccaaatcagctattgttatcaatcgcctctgaaaatcaacttatcaagcagt
tcacagctatcagatgttaaaaatctcaaaagttcattggaaaagtgctaaaggaatcag
ctctcccctccccattcccctcctcccgctttcactgctcccatcctcatgccagcattt
caaatgacagcaaagtccaggagacatcagtcctgtcggactcaatttgtgtctgtgcaa
gcgtatcagagccaactgctacataatgactccgtgtgatcacagagatggagacctatg
aatgctcactcagggaagaagtgatttggcttttcctcctactcagctgaagtgcataag
aagaccaaattttttcaaatgaaccttcaaatgttactcctggactagcaacagtgatag
gatctagcactctagaaacgaatgcaggtataaacatacatatttatccttaaatgggtt
gtgcccaaaggaggtcagaggtgtgaagatgaaacgtattctaaatgttcattccagcta
atctccattccttatcttgtttattacacagcaacattgccaaaagggaaatgctagctg
cctatcagtaaggtggaatttaaatttaggtacaaaaattggaaatggattcttaagaaa
ataattaaaccaaaaataaacaggataaaagaatattataaggagtttccattaatctat
agtaaggcttgctaagtactctgaaaaaaaaaaagagcaaggaggttcagtgatattaaa
agtaccacgttttaccttacttccatcacacattatccagcatttgtccaatagcctcag
cagaagccaaccctttgatttttatatgttctgctccttctttcttgagacagagtctca
ctctctgtcaagcaggctggagtgcagtggcacaatctcagctctctgctacctccgcct
cctcagttcaagcgattctcctgcctcagcctcctgagtggctgggattacaggtgtgcg
ccaccacgcctggctaatttttctatttttagtagaggcagggcttcaccatattggtca
ggctgatcttgaactcctgaccttgtgatccgctcgcctcggcctcccaacgtgctggga
ttatagatgtgagccactgcacccggctctctgtctttcatcagcagggacatgcagata
gaactcaaccatgtatatgaatctaaaatacaatttcaaaaaatttataactccccggtt
tcttatttctcataccacaaagatcttatgaaacaataattttgctgaattccaattaac
tgaattgtatatcagcttctgtatatctgtacatgggtggttggagaaactaacagttca
gagggcaatacgatgcatgtaatataatttgaaatggaacaacaaagagcgcacttgcct
aaaagccttaacaaatcacggtttcaagcgatcacataaagtgacacctatccaactctt
tttcttcaacttaccattgtaacacttttctgtaataagtatattcatattcaaaccaat
atgaatgttgaaggatttgtactattttttcagctttctatactgttatttgtgtctaaa
tactgtattaaaattttctttaaaaaaagacaaactagggcctagagtcccttagaaaat
ggcagattataggctttgtatgggaaatgtagaaaattagtcaacatcttgccataccag
aagcaaggaagttgtcggaactactaggctatattaaaaaaaaaaaATCCAAGATGATGA
GGTGCC
Primer
(+)CACCTCCAGCAATAACCTAATCCACT
(+)GGCACCTCATCATCTTGGAT


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