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Mouse element [ mm1743 ]


Position: chr6:52,204,789-52,205,362 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Hoxa11as - Hoxa13

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GAGCAGATGGAAAAGGTCGTtttttcaagttccatgtttataatttttattcagaaagtt
tcctttttagaaaaaatacttgaatgatattttcaacatcattattcatggaccagtgtc
tgcgttattattcctgtgcttttaggagtttttgttggcgttttttgtttattttttgtt
ttgtttttcaggaggaggccaatgttctcctgactgtcttgttcaaaaagttttaggctg
gttactatttaaaaataaagaagtctccagtcatggtagcatattccattaaccccagca
ctctggagaccaggcaggtgaatttctgagttcgagaccatcctggtctacagagtgagt
tccaggacaaagaaactgtatctcagaaaacaaaataaaacaccaccatcaacaacaata
ataaaataaaaaaataaaaatatctaagaagtgattataatccataaccacctcaactaa
tctgtaaatccatgccatgtctattttaaataagaagggagttatctgagattggcactg
tcaacaaccatgtcAGAACTAAAGGGAGGGGCAC
Primer
(+)GAGCAGATGGAAAAGGTCGT
(+)GTGCCCCTCCCTTTAGTTCT


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