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Human element [ hs1743 ]


Position: chr9:2,240,936-2,242,833 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: SMARCA2 - VLDLR-AS1

Timepoints:
e11.5

Expression Pattern
cranial nerve (4 out of 4 embryos) 
forebrain (4 out of 4 embryos) 
hindbrain (rhombencephalon) (4 out of 4 embryos) 
midbrain (mesencephalon) (4 out of 4 embryos) 
neural tube (4 out of 4 embryos) 
trigeminal V (ganglion, cranial) (4 out of 4 embryos) 

Embryo 1


Embryo 2


Embryo 3


Fasta sequence
CACCAGGCCGCATGAATATCTTTattcatgagcctggatccctaagaatgagggtgcctc
tgactattcttaattcgttcagcagtcacattcatcgcacaacacccaaagacatatttg
gtctgcagttcgcacctattcctctggagctttgaacagttaataaacattagctcgtta
gcattaattaaaaggcatcttattacagcaggatccagagttaccacctagccactctaa
aaaccagcggtcggcttgacttccagcaaagcctcttttatcgatggcttctgtgggtgt
agttaacctccgccgtcccccgtctgatctcattatttcagatcctcgcatcctggctgg
ctttgccttctctctctcctcgatcctccctttacataaatgcgattgtttcgttgcttc
cttcctcggagcccgggttttgtccgggcttggctcggtttgcgcgtttaagaacgagcg
cctaggcctccgggcaagggtctagagctcccgcagcccttcactgggtgacctcctcct
gtcggggccatttgtcttcagggcctctctttgaggctctgaacaggacgctccaagtgg
ggcccgagcgcttggcagacaagcccctggattgttgctagagaccctcaggtcgccttg
gggcggagcgcgcctttcatgaatccgggagcctgggatgcgcatggcgaggagggggga
aacgtgctggggagaaggcaggccttgatgtacgccctggtggacaaaagctgctagtgt
cagcttgatttgcaagatcaacattcatgagtttcaccgcttagaaaggggcattatctg
caaaccggagactgaatggaagccataaacaagtgatttcacactaccaagcaggaagaa
tattctacctcctcaattattctgaacagcatgtttggccccttccaggttcccaccgct
agcgagccctccacccctggtgtgtgcaaacggtggacctttcggcgcctaagaaaccgg
gtgctgagcccgggagcagcgcctgcttttcttcccaagatccactccgggttttgccta
gcgctgctccgggaacccattccagacgcaggtaacgccaggcaacgttttccttctcac
ccgcccaaggccagccccgagccgccggggttccaggcccaacacagcacagatgcacgt
ttcaaaatgtgctcgaatatgcagcctgcatcaaaggcgttgggaggctctttcatcctc
tcagctgcctaagaagggacatgctcccagctaccctcatttgtggctgggtttactctg
aaatgaagatgtacctctggatgcaaaaagaaagggtggaaggtttttttccccctactt
cttgcacccgatttctcattttgcctcgccctcatcctcatcctttgtgtatgccaggct
gtgttaaccctttgagaacccccgtggcttgctcttttctttcttccttacggttgtcat
ccggtttgtagcctgacttcttcggcctgtcacgtacccctttccttttcctggaagtgg
ttttgttgtaggacagccacaggtggacggctggaccttaccaagctttgaagggcgagg
accgggcgaaggcaaaacctgggaaggctctggctgccgccagaggaccgggcggagcaa
ccacagtcactgtggttatcatgtccagcctcctgggacctccacttagcttggctgtca
ccctgacccccgcccgcacctccccagctgctgatctcggggaggcagccctccctgagg
tgctgagggcaggaccctggcgagcagaagtgaagggtttaagagccatctccctactag
aatggtgccctgatgtttAATGGCAAATTACCCAGCAA
Primer
(+)CACCAGGCCGCATGAATATCTTT
(+)TTGCTGGGTAATTTGCCATT


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