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Human element [ hs1742 ]


Position: chr8:32,064,662-32,066,126 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: NRG1-IT1 - NRG1-IT3

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CACCCTTTGGAGGAAGTAAGCctctagaacatgacagtctctggggtatgctattttcag
gtaattttaaatgtcgctttccaacaaaaatgcaatactattatctttttttttaatgac
aaagaaaagcaaaacaagtattatattggtgcaaaagtaatgcagtttctgccatttctc
ttaatgccattactcgtaagggcagaaatgaccattacttttgcatcaacctaatacctc
cagattttagatatttgagtgccattgcttgatatatcttttgttttttcttctggaaat
tttggttactttagttgcataaaggatgacttccattttaccctgttaagcatctctgtc
tggtcagaagctactactctgttctttctagttcagtagggaacaatcagtttccttctc
aattttcagctaatctttatgaatgaaatttgattaaatctagcaaaactatgcaaacat
cataacagcatatggggagccttcctgtagtaccagtgggctatttccgtctaataacag
attcaaaaaatccaattagacagtttgaaaaaagaaagccagagttaaaaatatctgact
gtttgactgagaacagcagggaatggtttataggccaatcatttatggtgaataggatct
tagtggtgagcaactcacatctctagcccattagaataatgtgttactcatattgctcct
aaagctttctacttaattataccaagttaaatagcagacattctcactcccttttgatgg
aaaatcacatttattcacccacacaataccatccttgggtgttaagggatgagagttgac
ctaatgggaagacaaacaaatggtttaggaaatgagacatgatttttttacacaaaggtt
aatgcacgagaaaagaaatgcctaggtctctgtctaatgtctatgtgttctcatcgaata
attcttaaatgaccctatttagtttgattttctaactacattagaaatatatgaaacaat
taagaaatcattttttacctgtcatatggcagatggactaacattgatcagggcagtcga
ggaggttgtaaggaaatgggtactctcaaacattgctggtgggactatgaagtgttttaa
ttttttttttttttttagacggaggtttgctcttgttgtccaggctggagtgaaatggcg
tgatctcggctcactgcatcctctgcctcagcctcccgagtagctggaattacaggcacc
ctccaccatgcccagctaatttttgtattttcagtagagacagggtttcaccatgttggc
caggctggtcttaaactcctaacctcaggtgatccgcccacgtcggcctcccaaagtgct
gggattacaggcgtgaaccaccgggcccagccaagtgttttaatttttaaaaactattTG
ACCATATGAAAATATAGATGTTCCA
Primer
(+)CACCCTTTGGAGGAAGTAAGC
(+)TGGAACATCTATATTTTCATATGGTCA


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