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Mouse element [ mm1741 ]


Position: chr2:92,875,013-92,877,129 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Prdm11(intragenic)

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCAGGCAAGGGTCCTAACTGtccagtgaatcctaaccccaaacagaccgaacccagctaa
accccaggtcaggaccgtgtaatagtcaaatactgatgacatcactacttcaagccaact
ccagtgtagacagaagagccaggaggagtagacctgagcctcagctctgccctcaagtac
ccacacaagaccctaccatcttcactgaactcttgggagcctcagttagtccatctgcca
actgggtcaatggcacaactcccaggctggctatgaataagttaagatcagctcacccct
ctgtgaaaaacagtggttccagtaacacgcgctgtcacggccacactctagggagaccca
aggcaccaagaaaataaatgggcaatgactgggctccaagacagttagacttgctgggtg
tggtggcatgtgcctttctttctaggcagaggtaggcagatccttgtaaacttgagacca
ccctgatggccaccctagagagtttcagagcaaccaggactacatggttggaccctgtgt
caaaacaatcaaagcaaagacaagagaggagcggggagttgctactggggcatactaaat
ggtgcctgaggcaaaccaagcccttgactgagccctgactcctgggtgcaacctaagagg
attacattgggggaccctgccgagcaggctttggatgtcctttgagaaacaggacttagg
cagtcctgcatgacattaaccagggaagctgccagcttcagggtgggcaggcagcagggg
gaaacctgagaccaccgacctaggatctgctcctcaccccctcacacacacacacagagc
gccactcttccagtgtgaccagagccacgtcgaaaccaaggcacctcagtgactccaggc
tggttggcctgaagcccaagctgggtcaggtgaagaaggcctgccctgccccaccccatt
ctgcaggagcgcagactcccctgaacagcagctgcccagcctgcggctgctgcaggaccc
agctggtctgggagcctaacagagagagtgagccaggggcacccttaacggggccccaag
gagaagggagaggctggtgctagtgggaggggtgctctcacagttccctcctgggcagcc
cccctccttgggcttgtggccacatgcaggcccaggcacaccttgggttcttcccagaaa
ccaagggcaaggtgggtccctcaagctcagaaaagagcctaggagaaagctgaaggagta
acctcgtcacggtacgctgtgctcccttgaagtggcacaggctgggcctagcttccaggt
gtggcagaaatgctggcctcagacctggccatcaggaaatcaacatgggaaacaactgca
ggccactgtcccttctgaccccagctctccagatggtaggccacaaaccagggtaacccc
agtctctacaacaagccccagcttccctcctccgtgcacgagccccaccaggccgcaaag
aacctggccactccactggctgctctccaggtcagaccctgcagctctagtgttagaggt
gggggaatgaagcttcacccacagccagcaaccacaagctcaggaccagatcagcctagg
agggctgtggcctcaccctaggggccttgctggctcaccaccccaggactgccccataga
atgggcagatagctcctccctggcaactcactccactgagtgcaaggacagcctcccaga
caagagaaaaacaaggaccgcaccccagggtggtcttgtccctcctctaaccgttccaag
cctcctgctgcagggacagaagttctcaacctaaaataaaagctcgctgcatctcacctc
tactaaggaatgatcaagacctcctcagtagctccacgcaagttcttccagtctctaggg
tcatcccctcccctctctcaaatgccaagacctcttgtcattcaatggctttctggcctt
cccaatgcttacctacacatacctgttctcagtgcccaaatgcccttccctcccctctcc
agacacacttctgcttttcctgaggggtgctcagctgctcccctacctctgggaagtGAA
CCTGCACTCTCTTCCCC
Primer
(+)ccaggcaagggtcctaactg
(+)ggggaagagagtgcaggttc


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