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Mouse element [ mm1740 ]


Position: chr18:56,174,300-56,176,940 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Zfp608 - Gramd3

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AACGGAAGGCATTGCATTGGccataaaaccagtgtaactgcgaaagaattcatacttatt
taatgacactttagaaattgggaggtaattaaaatgaagtaggaatttttaaaaagccaa
agccaagcctaccagtatataaattgaaacattttctttgttttccaagcacataaaaca
tagtaagttttacatagaggtttgaggggtttttttctcccactctcccctgcctgcctt
ttttaaaaaagcctactgggaacagaataattttgactcctcaggatttccacttctaat
tgctaggagggttcattatcagctgtctgaagtgcaatacatcaaccttgcaatgctgag
ttacaaaagacattcacgcatctgatgggctgctgtgctaaatacatcttaatttgtgct
gcatctgctgttttctgggttgtttggcatgcagtgaatgctgcagacattagagaagct
tcctggattattcttataagaaaaaaaaaaaaacttcatttaaaaaaaatcattgctgtc
ttccatgattattcaactgtgcctgagaacaccataaactcaatttttatgtacacacat
ataaaaaaaaagacctcatgcatttgaatatgtatatgtatattagtctaaatgcacata
tatttgcatgtatgtggagccaaatattcagttcaatcacataaagccatacaaacctcc
ttcagccgtagccggatgcataaagatgcgcattcaggctcacagctctggcggggatac
aagtgctctctaagtcactcggatctggttttagtttgcttgctatgcaaaagatgtcag
caaggttggcactccgggttcagccttatccaagccaccgttcgagaagggaacatatgc
acttcagcaggatccaggataaaccagtctcaatattaaggaagtttaaatccgacttgg
aaaagaaaacaaataccttgtctggggcctgtgcctccctcagtcttttcatttaaaaaa
aaaaaaaaaaagagcagcatcaaagatagaagcagagccagtcagtcccacagcgcctca
tgctccctacggccctgggtacagatgcactgagggaggtgggcgcggcagcagtgggtt
tgctcatatatgtcatttttcaattatttcgtgtttacttaccacttgaaatgtagaaga
gatggaaagaaaaaaaacttaggatgaaatgcaaatagtatttcctttgcgttgctttag
ggaaaggggtggaaggcagccatagccatttctacgtgtgatccactgtttataagacca
gaatttatttaccaccattttgtaccacataatccttttatacacacacattcgcgtgta
cgcgcgcgcgcgcacacacacacatacacacacacacacacacacacttacacactttga
gggaacctcaataacaagcatgcgtttggtgcaaagcagttttcaatcacagaggccaac
ctgctttgtgggctgcagggaggcaggtctgctccctcacttctgcctgccccacccctc
acctagacggagcagtacccctatttacataatgtcaatcagactccagtgttgttttcc
caagaacatgcacaagtgattataggcagccattatgactggcagagttacagacaaatc
agggcttccgttatggagtattttgaatcaataaggtgtactgctcaacccgggctgaga
aaaccacttcataaaataacagcattcgtaaaggttaatcaattcagctaattgtaaatg
ctctcaattgtcagtccctaagcagtcccttctctttgtagctagtaattcactgtggga
tgtgcagctccaaaggagaatggagaaagagggggaagcaggcaaatttctcattactct
atctccatgttgtgctctgttggtgtctgcgaatgtcaatatatttaccacagggagata
gcctttttttccctgctagcaccgtgttgcctccctcattatatacaaaacaaagtaaag
agcctaattatattgggtctaagcagatggaaaggaaaccagggtattgatttggggggg
ccacgtcttaaggcaatgcagatgactaataaggtgggcaggtgaagagatgcccactca
ttgacggcagcaaggcagagatatcttattcactgtctggatatgatgcagataaagaga
cttccttttcccttcccttcccctgacagcacaacacacacacacacacacacacacaca
ctcacactgccaaccctgctaagtcgccagaggaaaatgactcttgcaggcggaggactt
aagagtgtctgttaagatcagagaagtggaaagaaatcatgtcaggcagattggaaaaat
tgtagtctgaaattgccctagacgctgccgttgatggaagcaaccacactgacggatgta
ggaatcctgtcttgccctgagatgttaccatagggctaccacatctccagttcatagatg
attgttctgaggccaaagaatgccatttgttacaaaagtcctagggaaattctagaaagc
agagacatggggtaagtaataaattatcctaagtttatgtCTCCGGTGCATTTTACAGTG
T
Primer
(+)aacggaaggcattgcattgg
(+)acactgtaaaatgcaccggag


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